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scnpilot_p_inoc_scaffold_1393_19

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 20637..21563

Top 3 Functional Annotations

Value Algorithm Source
Type III effector Hrp-dependent outers n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMG4_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 308.0
  • Bit_score: 404
  • Evalue 6.90e-110
  • rbh
Type III effector {ECO:0000313|EMBL:KFG68898.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 309.0
  • Bit_score: 419
  • Evalue 5.00e-114
Hrp-dependent type III effector protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 302.0
  • Bit_score: 404
  • Evalue 2.60e-110

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
GTGAGCGACGCCCGTGCGCTCCCCCCGGGGCCGCTGATCGCCTTCTATGGCGACGACTTCACGGGCTCGTCGGCGGCCATGGAGGTGCTGGCCTTCGCCGGGCTCGAGACCATCCTGTTCCTCGCGCCGCCCACGCAGGAACGCCTGGCCCGTTTCGCGCACTACCGCGCCATCGGCGTCGCGGGCGTGGCGCGCTCGCGACCGCCCGAGTGGATGGACGAGCACCTGCCCCCCGTCTTCGAGCAACTCGCCGGCATCGGCGCGCCCGTCGTCCACTACAAGGTGTGTTCGACCTTCGACTCGGCGCCCCACATCGGCAACATCGGCCGCGCGGCCGAGATCGCCCGGCGGCGCTTCCCGGGGTGGATCCCGCTCGTGGTGTCGGACCCCGGCATGGGCCGCTTCCAGGCCTTCGGCAACCTGTTTGCGCACGCCAACGGCGTGGGCTACCGGCTCGACCGCCACCCCACCATGGCGGCCCACCCCACCACGCCCATGCACGAGGCCGACCTGGGCCGCCACCTGGCCGCGCAGACCGATCTGCGCGTGGGCCTGGTGGATTTCGCCAGCATGAAGCGCGGCCGGGCCGATGCACTGTTGGCGCAGGAGATCGAACGCGGCGCGGCCATCGTCTCGGTGGACGTGCTGGACCCCGAAACCCTGCGCGAGGCCGGCCGCCTGATCTGGGAACGGGGCGCGGCGCAGCAGTTCGTGCTGGGCTCGCAAGGCGTCGAGCAGGCGCTGGTGGCGCACTGGCGCGCGGCCGGGCTGATGCCGCTCACCTCGGCCAGCGTCGGCTGCGCCCGCGTGGAGCGCCTCGCGGCCGTGTCGGGTTCGGTGTCGCCGATCACGGCGGCGCAGATCGAGCACGCCTGCGCGCGGGGCTTCGAGCCCATCGTGCTGGACGCGCGGCTGGCGGTCCACGAG
PROTEIN sequence
Length: 309
VSDARALPPGPLIAFYGDDFTGSSAAMEVLAFAGLETILFLAPPTQERLARFAHYRAIGVAGVARSRPPEWMDEHLPPVFEQLAGIGAPVVHYKVCSTFDSAPHIGNIGRAAEIARRRFPGWIPLVVSDPGMGRFQAFGNLFAHANGVGYRLDRHPTMAAHPTTPMHEADLGRHLAAQTDLRVGLVDFASMKRGRADALLAQEIERGAAIVSVDVLDPETLREAGRLIWERGAAQQFVLGSQGVEQALVAHWRAAGLMPLTSASVGCARVERLAAVSGSVSPITAAQIEHACARGFEPIVLDARLAVHE