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scnpilot_p_inoc_scaffold_1393

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1393_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..183
DNA (183bp) protein (61aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMI9_9BURK
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:EIK90429.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sourc
electron transfer flavoprotein alpha-subunit
scnpilot_p_inoc_scaffold_1393_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198..950
DNA (753bp) protein (251aa)
Ribosyldihydronicotinamide dehydrogenase (quinone) (EC:1.10.99.2) Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
NAD(P)H quinone oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGD1_9BURK rbh
NADPH-dependent FMN reductase family protein
scnpilot_p_inoc_scaffold_1393_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(987..1862)
DNA (876bp) protein (292aa)
Acyl-CoA thioesterase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGD0_9BURK rbh
Acyl-CoA thioesterase {ECO:0000313|EMBL:EIK88270.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. P
acyl-CoA thioesterase
scnpilot_p_inoc_scaffold_1393_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2107..3021
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNV5_9BURK rbh
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EIK90895.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sou
transcriptional regulator, LysR family
scnpilot_p_inoc_scaffold_1393_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3052..4053)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89722.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
tctC; extracytoplasmic binding receptor
scnpilot_p_inoc_scaffold_1393_6
Comamonas sp. 7D-2, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4050..5804)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Comamonas sp. 7D-2 RepID=M9UWU0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:AGJ70620.1}; TaxID=1232667 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. 7D-2.;"
acetohydroxy-acid synthase small subunit
scnpilot_p_inoc_scaffold_1393_7
Comamonas sp. 7D-2, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5801..7282)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Comamonas sp. 7D-2 RepID=M9UX03_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:AGJ70621.1}; TaxID=1232667 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. 7D-2.;"
aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_1393_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7297..8376)
DNA (1080bp) protein (360aa)
OmpC family outer membrane porin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI0_9BURK rbh
OmpC family outer membrane porin {ECO:0000313|EMBL:EIK89720.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogeno
gram-negative porin family protein
scnpilot_p_inoc_scaffold_1393_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8444..11659)
DNA (3216bp) protein (1072aa)
Reductive dehalogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI1_9BURK rbh
Reductive dehalogenase {ECO:0000313|EMBL:EIK89721.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein
scnpilot_p_inoc_scaffold_1393_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11713..12732)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI2_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89722.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
tctC; extracytoplasmic binding receptor
scnpilot_p_inoc_scaffold_1393_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12777..13640)
DNA (864bp) protein (288aa)
Protocatechuate 4,5-dioxygenase, beta chain {ECO:0000313|EMBL:EIK89723.1}; EC=1.13.11.8 {ECO:0000313|EMBL:EIK89723.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
protocatechuate 4,5-dioxygenase (EC:1.13.11.8) rbh
Protocatechuate 4,5-dioxygenase, beta chain n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI3_9BURK rbh
scnpilot_p_inoc_scaffold_1393_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13633..14046)
DNA (414bp) protein (138aa)
Protocatechuate-alpha chain {ECO:0000313|EMBL:EIK89724.1}; EC=1.13.11.8 {ECO:0000313|EMBL:EIK89724.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
Protocatechuate-alpha chain n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI4_9BURK
ligA; protocatechuate 4,5-dioxygenase, subunit alpha
scnpilot_p_inoc_scaffold_1393_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14043..15224)
DNA (1182bp) protein (394aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:EIK89725.1}; EC=1.14.13.2 {ECO:0000313|EMBL:EIK89725.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI5_9BURK rbh
4-hydroxybenzoate 3-monooxygenase
scnpilot_p_inoc_scaffold_1393_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15370..15969)
DNA (600bp) protein (200aa)
Transcription regulator tetR family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE1_9BURK rbh
Transcription regulator tetR family protein {ECO:0000313|EMBL:EIK88281.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source
HTH-type transcriptional regulator betI
scnpilot_p_inoc_scaffold_1393_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16088..17302
DNA (1215bp) protein (405aa)
Major facilitator superfamily protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE2_9BURK rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EIK88282.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr
Arabinose efflux permease
scnpilot_p_inoc_scaffold_1393_16
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17316..18215)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7J8_METS4 rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACA16220.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
scnpilot_p_inoc_scaffold_1393_17
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18444..19244
DNA (801bp) protein (267aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium sp. CF142 RepID=J2L4Y7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ32504.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
family 3 extracellular solute-binding protein
scnpilot_p_inoc_scaffold_1393_18
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19381..20640
DNA (1260bp) protein (420aa)
ribulose bisphosphate carboxylase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000152E5D0 rbh
RuBisCO-like protein {ECO:0000313|EMBL:EJZ32505.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. C
RuBisCO-like protein
scnpilot_p_inoc_scaffold_1393_19
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20637..21563
DNA (927bp) protein (309aa)
Type III effector Hrp-dependent outers n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMG4_METNO rbh
Type III effector {ECO:0000313|EMBL:KFG68898.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Hrp-dependent type III effector protein
Displaying 19 items

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