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scnpilot_p_inoc_scaffold_2130_12

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(9927..10826)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 299.0
  • Bit_score: 465
  • Evalue 3.20e-128
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK91621.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 299.0
  • Bit_score: 465
  • Evalue 4.50e-128
Transcriptional regulators, LysR family similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 297.0
  • Bit_score: 274
  • Evalue 5.00e-71

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGACCGGCTCGACGACCTGATGGCGTTTCTGCGCGTGGCCGATGCCGGCGGGTTTTCGGCGGCCGAGCGCAGCACGGGCGTTCCGAAGTCGCGCCTGAGCCGGCGCATCGCCGCGCTGGAGAAGGAGCTGGGCGTGCGCCTGGTGCAGCGCTCGTCGCACGCTTTCCACCTCACCGACGTGGGCGAGCGCGTCCACCGGCACGCCCGCGCGATAGCCGACGAGGCGAACGCCGTGCGGGCCACGGTGAGCGAGGCGCAGGCCGAGCCGAGCGGCCTGATCCGCGTGAGTTCCTCGCTGCTGCAAGGCGAGCTTTTCCTGGCGGGCTGGCTGGCCGAGTTCATGAACCGGTACCCGAAGGTCACGGTGTCGCTGGACCTGTCGAACCACTACGTGGACATGCTGGCCGAGCGCATCGACCTGGCGATCCGGGTGTCGGCGGCGCCGCTGGCGGCGGCGGATCTCGTGGCCCGGCCGATCGGCACCGGGCGCATGGTGCTGGTGGGCCACCGGGCCCTGGTCGAGCGCCACGGCGCGCCGCACTCCATCGCCGAGCTCGGCGGCTATCCGTTGATCGCGCAGGTTCAGGGCGAGACCGTTCGCCCCTGGGTCTTTCGTGGACCCGACGGGCACGAACTGAACTACCAGCCGCAGGCCCGCTTCGTCAGCAACAACCTGCTGGCCTTGCGCGAAGCCCTGTTGGGCGGCGCCGGTGTGGCCCAGATCCCGCGCGAGGCCTGCATCGACGCACTGCGCACCGGCGCCTTGGTTGAACTGCTGCCCGGGCTGGAGCCACCGGCGTCCACGGTGTATGCGATTTACCCCAGCCGGCGCGGGCTGGCTTTCGCGGTGCGCACCCTGATCGACTTTCTGCAAGAGCGATTCCGCGGCGGCGCCTGA
PROTEIN sequence
Length: 300
MDRLDDLMAFLRVADAGGFSAAERSTGVPKSRLSRRIAALEKELGVRLVQRSSHAFHLTDVGERVHRHARAIADEANAVRATVSEAQAEPSGLIRVSSSLLQGELFLAGWLAEFMNRYPKVTVSLDLSNHYVDMLAERIDLAIRVSAAPLAAADLVARPIGTGRMVLVGHRALVERHGAPHSIAELGGYPLIAQVQGETVRPWVFRGPDGHELNYQPQARFVSNNLLALREALLGGAGVAQIPREACIDALRTGALVELLPGLEPPASTVYAIYPSRRGLAFAVRTLIDFLQERFRGGA*