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scnpilot_p_inoc_scaffold_2130

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2130_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..122)
DNA (120bp) protein (40aa)
Ribosome biogenesis GTPase A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ5_9BURK
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenoph
GTPase YlqF
scnpilot_p_inoc_scaffold_2130_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

261..743
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ4_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK91634.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_2130_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(764..2332)
DNA (1569bp) protein (523aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-
gshA2; glutamate--cysteine ligase GshA (EC:6.3.2.2)
Glutamate--cysteine ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ3_9BURK rbh
scnpilot_p_inoc_scaffold_2130_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2367..3353)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
tRNA-dihydrouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ2_9BURK rbh
dihydrouridine synthase
scnpilot_p_inoc_scaffold_2130_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3412..4077
DNA (666bp) protein (222aa)
Pseudouridine synthase {ECO:0000313|EMBL:EIK91631.1}; EC=5.4.99.12 {ECO:0000313|EMBL:EIK91631.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
rluA; ribosomal large subunit pseudouridine synthase A (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ1_9BURK rbh
scnpilot_p_inoc_scaffold_2130_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4104..4880
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQZ0_9BURK rbh
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:EIK91630.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hy
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_2130_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4955..6139
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIK91628.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIK91628.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY8_9BURK rbh
scnpilot_p_inoc_scaffold_2130_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6148..7335
DNA (1188bp) protein (396aa)
Lipase/esterase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY7_9BURK rbh
Lipase/esterase {ECO:0000313|EMBL:EIK91627.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
beta-lactamase
scnpilot_p_inoc_scaffold_2130_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7519..8055
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXQ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI75332.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
hypothetical protein
scnpilot_p_inoc_scaffold_2130_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8084..8980)
DNA (897bp) protein (299aa)
Class I cytochrome c n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY5_9BURK rbh
Class I cytochrome c {ECO:0000313|EMBL:EIK91625.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PB
class I cytochrome c
scnpilot_p_inoc_scaffold_2130_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9083..9820)
DNA (738bp) protein (246aa)
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY2_9BURK rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIK91622.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hy
scnpilot_p_inoc_scaffold_2130_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9927..10826)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY1_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK91621.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr
Transcriptional regulators, LysR family
scnpilot_p_inoc_scaffold_2130_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10832..11362)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK91620.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_2130_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11489..12022
DNA (534bp) protein (178aa)
Cupin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX9_9BURK rbh
Cupin {ECO:0000313|EMBL:EIK91619.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cupin
scnpilot_p_inoc_scaffold_2130_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12117..12986
DNA (870bp) protein (290aa)
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI0002DCDD25
transmembrane protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2130_16
unknown

Not on your lists

12998..13759
DNA (762bp) protein (254aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2130_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13744..14247
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH30_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98771.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_2130_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14228..14872)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK91617.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
uncharacterized protein conserved in bacteria
scnpilot_p_inoc_scaffold_2130_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14909..15739
DNA (831bp) protein (277aa)
Integral membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX6_9BURK rbh
Integral membrane protein {ECO:0000313|EMBL:EIK91616.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga s
hypothetical protein
scnpilot_p_inoc_scaffold_2130_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15740..16102)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91615.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
scnpilot_p_inoc_scaffold_2130_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16171..16398)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX4_9BURK
glycogen synthase
Uncharacterized protein {ECO:0000313|EMBL:EIK91614.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
scnpilot_p_inoc_scaffold_2130_22
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16395..18116)
DNA (1722bp) protein (574aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
long-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] id=5079471 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
long-chain-fatty-acid--CoA ligase
scnpilot_p_inoc_scaffold_2130_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18340..19377
DNA (1038bp) protein (346aa)
Extracellular solute-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX2_9BURK rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:EIK91612.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydro
extracellular solute-binding protein
scnpilot_p_inoc_scaffold_2130_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19483..20661
DNA (1179bp) protein (393aa)
Amino acid ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX1_9BURK rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EIK91611.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog
amino acid ABC transporter permease
scnpilot_p_inoc_scaffold_2130_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20667..21770
DNA (1104bp) protein (368aa)
Amino acid ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQX0_9BURK rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EIK91610.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog
amino acid ABC transporter permease
scnpilot_p_inoc_scaffold_2130_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21780..22532
DNA (753bp) protein (251aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK91609.1}; EC=3.6.3.27 {ECO:0000313|EMBL:EIK91609.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQW9_9BURK rbh
ABC transporter-like protein
scnpilot_p_inoc_scaffold_2130_27
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22611..23366
DNA (756bp) protein (252aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EIK91608.1}; EC=3.1.4.- {ECO:0000313|EMBL:EIK91608.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQW8_9BURK rbh
glycerophosphoryl diester phosphodiesterase
Displaying 27 items

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