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scnpilot_p_inoc_scaffold_2252_2

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(97..579)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 160.0
  • Bit_score: 258
  • Evalue 1.50e-66
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNY5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 159.0
  • Bit_score: 294
  • Evalue 6.80e-77
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 159.0
  • Bit_score: 294
  • Evalue 9.60e-77

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGAACGCCATCCGCATCGGCGAAGGATGGGACATCCACCGCCTGGTTACCGGTCGCCCACTGGTGTTGGGGGGGATCACCGTGCCGCACACGCATGGCCTGCTGGGGCATTCCGACGCTGACGCGCTGCTGCATGCCATCACCGACGCGCTGCTCGGCGCCGCCGCGCTGGGCGATATCGGCCGCCACTTTCCCGACACCGACGAGCGCTTCCGCGGCGCCGACTCGGGTGCGCTGCTGGCCGAGGCCGCTCGGCGCGTGCGCGCCGAAGGCTACGAGATCGGCAACCTCGACAGCACCGTGGTTGCGCAGGCGCCCAAGCTGGCGCCGCACATCCCGGCCATGGTCGAGCGCATCGCCGCCTTGCTCGACTTGGCGGTGGGCCAGGTGAACGTGAAGGCCAAGACGGCCGAGAAGATGGGGCCGGTGGGGCAGGGCGAGGCCATCGAGGCCCGCGCCGTGGCCTTGTTGTTCAAGGTCTGA
PROTEIN sequence
Length: 161
MNAIRIGEGWDIHRLVTGRPLVLGGITVPHTHGLLGHSDADALLHAITDALLGAAALGDIGRHFPDTDERFRGADSGALLAEAARRVRAEGYEIGNLDSTVVAQAPKLAPHIPAMVERIAALLDLAVGQVNVKAKTAEKMGPVGQGEAIEARAVALLFKV*