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scnpilot_p_inoc_scaffold_2252

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2252_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2252_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(97..579)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNY5_9BURK
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
scnpilot_p_inoc_scaffold_2252_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(576..1298)
DNA (723bp) protein (241aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNY4_9BURK rbh
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
scnpilot_p_inoc_scaffold_2252_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1377..4868
DNA (3492bp) protein (1164aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=795665 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNY3_9BURK rbh
transcription-repair coupling factor
scnpilot_p_inoc_scaffold_2252_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4865..5593
DNA (729bp) protein (243aa)
Phosphoserine phosphatase serb {ECO:0000313|EMBL:EIK90922.1}; EC=3.1.3.3 {ECO:0000313|EMBL:EIK90922.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase serb n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNY2_9BURK rbh
scnpilot_p_inoc_scaffold_2252_6
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6403..6984)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQM6_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81830.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
scnpilot_p_inoc_scaffold_2252_7
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6947..7426)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YQ9_RHOFD
hypothetical protein; K06919 putative DNA primase/helicase Tax=CG_Rhodof_01
hypothetical protein
scnpilot_p_inoc_scaffold_2252_8
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7702..7980)
DNA (279bp) protein (93aa)
adenine/guanine phosphoribosyltransferase and related PRPP-binding protein
Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein {ECO:0000313|EMBL:BAO81829.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
scnpilot_p_inoc_scaffold_2252_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7991..8248)
DNA (258bp) protein (86aa)
Phage transcriptional regulator, AlpA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UK9_RHOFD
phage transcriptional regulator AlpA
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_2252_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9003..10244)
DNA (1242bp) protein (414aa)
Integrase family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3Z3_VARPE
integrase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_2252_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10552..11013)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNY0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90920.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_2252_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11139..11465)
DNA (327bp) protein (109aa)
Integration host factor subunit alpha n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNX9_9BURK
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|SAAS:SAAS00062113}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=795665 species="Bacteria; Proteobacter
ihfA; integration host factor subunit alpha
scnpilot_p_inoc_scaffold_2252_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11495..13606)
DNA (2112bp) protein (704aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNX8_9BURK rbh
Displaying 13 items

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