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scnpilot_p_inoc_scaffold_2736_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(107..493)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV05_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 131.0
  • Bit_score: 247
  • Evalue 7.70e-63
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 131.0
  • Bit_score: 247
  • Evalue 1.10e-62
rplQ; 50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 122.0
  • Bit_score: 226
  • Evalue 3.90e-57

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGCGTCACGGACACGGACTTCGCAAACTCAACCGCACCAGCGAGCACCGCCTGGCGATGCTGCGCAACATGATGAACTCGCTGCTCACGCACGAGGCCATCAAGACCACGCTGCCCAAGGCCAAGGAACTGCGCCGGGTCGTCGAACCCATGATCACCCTGGCCAAGGAGCCGACGGTGGCGAACCGCCGCCTCGCCTTCAACCGCCTGCGCGACCGCGATGTGGTGGTCAAGCTGTTCGACGAACTCGGCCCGCGCTTCAAGGCCCGTCCCGGTGGCTACACCCGCATCCTGAAGATGGGTTTCCGCGTGGGCGACAACGCGCCCATGGCCCTGGTGGAGCTGGTTGACCGCGCCGAACCGGCCGGTGAAGCCGATAAAGCGTGA
PROTEIN sequence
Length: 129
MRHGHGLRKLNRTSEHRLAMLRNMMNSLLTHEAIKTTLPKAKELRRVVEPMITLAKEPTVANRRLAFNRLRDRDVVVKLFDELGPRFKARPGGYTRILKMGFRVGDNAPMALVELVDRAEPAGEADKA*