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scnpilot_p_inoc_scaffold_2736

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2736_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(107..493)
DNA (387bp) protein (129aa)
50S ribosomal protein L17 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV05_9BURK
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge
rplQ; 50S ribosomal protein L17
scnpilot_p_inoc_scaffold_2736_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(619..1458)
DNA (840bp) protein (280aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV06_9BURK
scnpilot_p_inoc_scaffold_2736_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1561..2184)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV07_9BURK rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
rpsD; ribosomal protein S4 and related protein
scnpilot_p_inoc_scaffold_2736_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2355..2759)
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV08_9BURK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
30S ribosomal protein S11
scnpilot_p_inoc_scaffold_2736_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2778..3143)
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV09_9BURK
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
rpsM; 30S ribosomal protein S13
scnpilot_p_inoc_scaffold_2736_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3166..3279)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV10_9BURK
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge
rpmJ; 50S ribosomal protein L36
scnpilot_p_inoc_scaffold_2736_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3322..3540)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV11_9BURK
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hyd
infA; translation initiation factor 1
scnpilot_p_inoc_scaffold_2736_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3544..4863)
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV12_9BURK rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
secY; preprotein translocase SecY subunit
scnpilot_p_inoc_scaffold_2736_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4887..5327)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV13_9BURK
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge
rplO; 50S ribosomal protein L15
scnpilot_p_inoc_scaffold_2736_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5342..5524)
DNA (183bp) protein (61aa)
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=5080769 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rpmD; 50S ribosomal protein L30
scnpilot_p_inoc_scaffold_2736_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5536..6054)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV15_9BURK rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogen
rpsE; ribosomal protein S5
scnpilot_p_inoc_scaffold_2736_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6073..6438)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV16_9BURK
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
rplR; 50S ribosomal protein L18
scnpilot_p_inoc_scaffold_2736_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6450..6983)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV17_9BURK rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogen
rplF; 50S ribosomal protein L6
scnpilot_p_inoc_scaffold_2736_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7008..7403)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV18_9BURK
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
30S ribosomal protein S8
scnpilot_p_inoc_scaffold_2736_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7422..7727)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV19_9BURK
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
rpsN; ribosomal protein S14
scnpilot_p_inoc_scaffold_2736_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7736..8275)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV20_9BURK rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
rplE; 50S ribosomal protein L5
scnpilot_p_inoc_scaffold_2736_17
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8278..8598)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDW9_9BURK
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter put
rplX; 50S ribosomal protein L24
scnpilot_p_inoc_scaffold_2736_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8609..8977)
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5080777 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge
ribosomal protein L14
scnpilot_p_inoc_scaffold_2736_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9179..10723)
DNA (1545bp) protein (515aa)
FAD dependent oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV23_9BURK rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EIK93063.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
aerobic glycerol-3-phosphate dehydrogenase
scnpilot_p_inoc_scaffold_2736_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10787..12109)
DNA (1323bp) protein (441aa)
Extracellular solute-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV24_9BURK
Extracellular solute-binding protein {ECO:0000313|EMBL:EIK93064.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydro
twin-arginine translocation pathway signal protein
Displaying 20 items

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