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scnpilot_p_inoc_scaffold_2736_3

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1561..2184)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV07_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 207.0
  • Bit_score: 391
  • Evalue 5.30e-106
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 207.0
  • Bit_score: 392
  • Evalue 3.30e-106
rpsD; ribosomal protein S4 and related protein similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 207.0
  • Bit_score: 358
  • Evalue 1.10e-96

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGGCACGTTACCTCGGCCCCAAGGCCAAACTGTCCCGTCGCGAAGCCAGCGACCTGCTGCTCAAGAGCGCGCGCCGCTCGATCAGCGACAAGGCCAAGTTCGACTCCAAGCCCGGCCAGCACGGCCGCACCTCGGGCCAGCGCACCTCCGACTTTGGCGTGCAGCTGCGTGAGAAGCAGAAGGTCAAGCGCACCTACGGCGTGCTCGAGCGCCAGTTCCGCCGCTACTTCGCCGAGGCCGACCGCCGCCGCGGCAACACCGGCGCCAACCTGCTGTTCCTGCTCGAGTCGCGCCTGGACAACGTCGTGTTCCGCATGGGCTTCGCCTCCACCCGCGCCGAAGCGCGTCAGATCGTGTCGCACAAGGCCATCACGGTGAACGGCCAGTCGGTCAACATCCCGTCCTTCCTGGTCAAGGCCGGTGACGTGGTCGCTGTGCGCGAGAAGTCCAAGAAGCAGGCCCGCGTGATCGAGGCGCTGGAACTGGCCCAGCAGATCGGCTTCCCCGGTTGGGTCGAAGTGTCGGTCGACAAGGTCGAAGGCGTCTTCAAGAAGACCCCTGACCGCGATGAATTCGGCTCGGACATCAACGAGTCGCTCATCGTCGAACTGTATTCGCGTTAA
PROTEIN sequence
Length: 208
VARYLGPKAKLSRREASDLLLKSARRSISDKAKFDSKPGQHGRTSGQRTSDFGVQLREKQKVKRTYGVLERQFRRYFAEADRRRGNTGANLLFLLESRLDNVVFRMGFASTRAEARQIVSHKAITVNGQSVNIPSFLVKAGDVVAVREKSKKQARVIEALELAQQIGFPGWVEVSVDKVEGVFKKTPDRDEFGSDINESLIVELYSR*