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scnpilot_p_inoc_scaffold_2736_13

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6450..6983)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV17_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 177.0
  • Bit_score: 327
  • Evalue 6.20e-87
  • rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogen similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 177.0
  • Bit_score: 327
  • Evalue 8.60e-87
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 177.0
  • Bit_score: 290
  • Evalue 4.00e-76

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCACGTATTGGAAAACTGCCGATCACGGTTCCCACCGGGGTCGAGGTCGTTCTCAAGGACGGCCTGATCAACGTCAAGGGCGCCAACGGTGCCCTGAGCCTGGCCGCCAACGCGCTGGTCAAGATCGACATCAACGCCGGCAAGGTGACCTTCGCGCCGGTCGACGAGTCGCGCGAGGCGAACGCCATGTCGGGCACCATGCGTCAGCTGGTCAACAACATGGTCACCGGTGTCAGCAAGGGCTTCGAGAAGAAGCTCAACCTGGTCGGCGTGGGTTTCAAGGCCCAGGCCCAGGGCGCCAAGCTCAACCTCACGGTGGGCTTCTCGCACCCGGTGATCATGGACATGCCCGCCGGCATCAAGGTGGAAACGCCCGCGCCCACGGAAATCGTGATCAAGGGTGCCGACCGCCAGCGCGTCGGCCAGATCGCGTCGGAAGTGCGCGCCGTGCGTCCGCCCGAGCCCTACAAAGGCAAGGGCATCCGCTATGCGGATGAGAAGGTCGTGATCAAGGAAACCAAGAAGAAATAA
PROTEIN sequence
Length: 178
MSRIGKLPITVPTGVEVVLKDGLINVKGANGALSLAANALVKIDINAGKVTFAPVDESREANAMSGTMRQLVNNMVTGVSKGFEKKLNLVGVGFKAQAQGAKLNLTVGFSHPVIMDMPAGIKVETPAPTEIVIKGADRQRVGQIASEVRAVRPPEPYKGKGIRYADEKVVIKETKKK*