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scnpilot_p_inoc_scaffold_2736_11

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(5536..6054)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV15_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 334
  • Evalue 8.40e-89
  • rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogen similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 334
  • Evalue 1.20e-88
rpsE; ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 172.0
  • Bit_score: 291
  • Evalue 1.80e-76

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCTAAGTTTCAGGCAAACATCAAGAACGAAGCGAACGAGGACGGTCTGCGCGAAAAGATGATCGCGATCAACCGCGTGACCAAGGTGGTCAAGGGCGGTCGCATCCTCGGTTTCGCAGCGCTCACCGTCGTCGGCGACGGCGATGGCCGCGTGGGCATGGGCAAGGGCAAGGCGCGTGAAGTGCCGGTGGCCGTGCAGAAGGCCATGGAGCAGGCCCGCCGCAACATGATCAAGGTGTCGCTCAAGGATGGCTCCCTGCACCATGCGGTGCACGGCGAACACGGCGCCTCGAACGTGATGATGCTGCCGGCCGTCAAGGGTACCGGCATCATCGCCGGCGGCCCGATGCGCGCCGTCTTCGAAGTGCTGGGCGTGACCGACGTCGTGGCCAAGAGCCACGGTTCGAGCAACCCCTACAACCTGGTGCGCGCCACGCTGGACGCGCTCGAGAAGTCCACCACCCCGGCCGAGGTCGCCGCCAAGCGCGGCAAGACGGTCGAGGAAATCCTGGGCTGA
PROTEIN sequence
Length: 173
MAKFQANIKNEANEDGLREKMIAINRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAREVPVAVQKAMEQARRNMIKVSLKDGSLHHAVHGEHGASNVMMLPAVKGTGIIAGGPMRAVFEVLGVTDVVAKSHGSSNPYNLVRATLDALEKSTTPAEVAAKRGKTVEEILG*