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scnpilot_p_inoc_scaffold_4033_5

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2515..2772)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNA8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 85.0
  • Bit_score: 167
  • Evalue 5.20e-39
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 85.0
  • Bit_score: 167
  • Evalue 7.20e-39
rpsP; ribosomal protein S16 similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 86.0
  • Bit_score: 140
  • Evalue 1.90e-31

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGTCGTCATTCGACTCTCCCGCGGCGGTGCCAAGGCCCGTCCGTTCTACACCATCGTCGCCGCCGACAAGCGTGCGCGCCGCGACGGCAACTTCATCGAGCGCCTGGGTTTCTACAACCCCAACGCCAAGGGCGGCGAAGAGAAGCTGCGCATCGCCACGGACCGCCTGAACTACTGGCTCGGCGTCGGTGCCACCCCGTCCGACACCGTCGCGCGCCTGGTCAAGGAAGCCAAGGCCGCTGCGCCGGCCGCCTGA
PROTEIN sequence
Length: 86
MVVIRLSRGGAKARPFYTIVAADKRARRDGNFIERLGFYNPNAKGGEEKLRIATDRLNYWLGVGATPSDTVARLVKEAKAAAPAA*