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scnpilot_p_inoc_scaffold_4115_3

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2361..3215)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMJ8_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 284.0
  • Bit_score: 460
  • Evalue 9.80e-127
  • rbh
branched-chain amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 284.0
  • Bit_score: 460
  • Evalue 2.80e-127
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGU53776.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 284.0
  • Bit_score: 460
  • Evalue 1.40e-126

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGACCCGGGCCTGCTGCTGCACCTGCTCAACATCGCCTACGAACTGGCCACGCTGGCGCTGACCACGCTGGGCCTGGCCGTGGTGTTCGGCCTGCTCGGGGTGATGAACATGGCGCACGGCGAGTTCGTGATGCTCGGCGCCTACGCCGTGGTCGCGGTGCAGTCCTGGGGCTGGCCGCTGCTGGCGGCGGTGCCGCTGGCCATGGCGGTCTGCGGCGCGCTGGGCTATGGCGTGGAGCGCTGGCTGATCCGCCCGCTGTACCAGCGCCCCTTTGACACCCTGCTGGCCACCTGGGCGCTGGCCATGCTGATGCGCAAGAGCGTGGAAGCGGTGTTCGGCAAGGGCTACCGCAACGTCGAGAGCGAGCTGGCCATGCCCATGAACCTGGCCGGCCTGCAGTACCCCGCCTACCGGCTGGGGCTGATCGCCTTCAGCGTGGGGGTGATCCTGTTCCTGTTCGTCTGGTACCGGCGCAGCGCCGTGGGGCTGCGCGTGCGGGCCATGGTCGGCAACCCGCTGCTGGCCCAGGCCCTGGGCATCGACACGCGCCGCCTGGCCTCGCAGGCCTTCGTGGTCGGCGTGGTCATGGCCGGGCTCTCGGGTGTGCTGCTGGCGCCGCTGATACGCATCGAGCCCGGCATCGGCGTGGACTACCTGCTCGACGCCTTCTTCGTGCTCGTGGTGGGTGGCCTGGGTTCGCTGGGCGGCCTGGTCGGCGGCGTGGGCGTCATCGGCGGCACGCAGTCGGTGGTGAGCAGCGTCTCGGGCCAAACCAGCGGCTACGCGGTGGTGCTGGTGCTGTCCATGCTCTTCCTGTGGCTGCGACCGAATGGACTCTTCTCGCGCCGCTGA
PROTEIN sequence
Length: 285
MDPGLLLHLLNIAYELATLALTTLGLAVVFGLLGVMNMAHGEFVMLGAYAVVAVQSWGWPLLAAVPLAMAVCGALGYGVERWLIRPLYQRPFDTLLATWALAMLMRKSVEAVFGKGYRNVESELAMPMNLAGLQYPAYRLGLIAFSVGVILFLFVWYRRSAVGLRVRAMVGNPLLAQALGIDTRRLASQAFVVGVVMAGLSGVLLAPLIRIEPGIGVDYLLDAFFVLVVGGLGSLGGLVGGVGVIGGTQSVVSSVSGQTSGYAVVLVLSMLFLWLRPNGLFSRR*