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scnpilot_p_inoc_scaffold_4115_4

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3222..4376)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XNS9_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 384.0
  • Bit_score: 586
  • Evalue 1.60e-164
  • rbh
putative ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 384.0
  • Bit_score: 586
  • Evalue 4.50e-165
Putative ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU53775.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 384.0
  • Bit_score: 586
  • Evalue 2.20e-164

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGACCGTCGCGCCCTCCTGCAAGCCACCGCCGGCCTGGCCGCCACCCTGGGCCTGGGCCGCGCGGCCATGGCCGCCAGCCCCCTGACGGTGGCCGTCATGATCCCGCAGAGCGGCCCCGCCGGCCTCTTCGGCCCCACCGCCAAGGCCTGCGCCGAGCTCGCCGCCGAGGTCATCAACGCCCAGGGCGGCGTGCTGGGCCGCCCGCTCAAGCTGGCCTTCGGCGACGCCGGCGCCGCGCCAGCCGAGGCCGCGCAGTCGGCGCTCAAGCTGTGGCGCGGCGCGGGTGCGGGCGCCGTCATCGGCATGCACGACAGCGCGGTGCGCGGCGCACTGGTCAACCTCTTCAAGGGCCAGGTGCCCTACTTCTACACGCCGGTCTACGAAGGCGGCGAGTGCGCCAAGGGCACCTACATGAACGGCGAGACGCCCTCGCAGCAGCTGGAGCCGGTCATCCCCTGGATCGCCGCCGAGCGCAAGCCCAAGAAGTGGTACCTGATCGGCAACGACTACGTCTGGGGCCGCAACACCAACGCCGCCGCCAAGGGCTACATCCAGAAGACCGGCGCCGAGGTGGTGGGTGACGAGTACCTGCCGTTCACGGTCGACAACTTCGACTCCAGCCTGGCGCGCATCCGCGACAGCGGCGCCGACGCGGTGCTGGTCTCGCTGGTGGGCGGCGCCTCGGTCAGCTTCAACAAGGCCTTCGCCGGCCTGGGCATGAGCGATCGTGCCCTGCGCCTGGGCACGCTGATCGAAGAGAACACGCTGGCCGGCATCGGCGCCGCCAACGCGCGCAACCTCTACGCCAGCACCGGCTACTTCGCCGGCTCCACCTCGCCCGCGGCCAAGGCCTTCCTGGACCGCTTCAACCAGCGCTTCAGCGCCCAGGCCCCGGGGCTGAGCACGCTCACCGAATCGGTCTACGAAGGCTTCCTGATGCTGCAGGCCATCGCCACCAAGGCCAAGTCGCTGGACGTGGCCAAGATGGACGCCGCCAGCGAGGGCGCGAGCTACCAGGGCCCGCGCGGCACCGTCACCATGCGTGCGCGCCACGTGGAGCAGGACGTGTTCGTCGCCGACGTCACCGACAAGGGCTTCCGCGTCGTCAAGACCTTCCCACGCATCGGCGCGGGCCAAACCTGCAAGGTCTGA
PROTEIN sequence
Length: 385
MDRRALLQATAGLAATLGLGRAAMAASPLTVAVMIPQSGPAGLFGPTAKACAELAAEVINAQGGVLGRPLKLAFGDAGAAPAEAAQSALKLWRGAGAGAVIGMHDSAVRGALVNLFKGQVPYFYTPVYEGGECAKGTYMNGETPSQQLEPVIPWIAAERKPKKWYLIGNDYVWGRNTNAAAKGYIQKTGAEVVGDEYLPFTVDNFDSSLARIRDSGADAVLVSLVGGASVSFNKAFAGLGMSDRALRLGTLIEENTLAGIGAANARNLYASTGYFAGSTSPAAKAFLDRFNQRFSAQAPGLSTLTESVYEGFLMLQAIATKAKSLDVAKMDAASEGASYQGPRGTVTMRARHVEQDVFVADVTDKGFRVVKTFPRIGAGQTCKV*