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scnpilot_p_inoc_scaffold_861

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_861_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..415
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AA37C
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_861_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

544..918
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003765A07
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_861_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1263..1535
DNA (273bp) protein (91aa)
superoxide dismutase, Cu-Zn (EC:1.15.1.1); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
superoxide dismutase, Cu-Zn (EC:1.15.1.1); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1] id=12493123 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
superoxide dismutase, Cu-Zn (EC:1.15.1.1)
scnpilot_p_inoc_scaffold_861_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1545..1895
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EFB06
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_861_5
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2024..2476
DNA (453bp) protein (151aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SU14_JANMA
hypothetical protein Tax=GWA2_Curvibacter_64_110_curated
hypothetical protein
scnpilot_p_inoc_scaffold_861_6
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2688..3833
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A20A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF01121.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
hypothetical protein
scnpilot_p_inoc_scaffold_861_7
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3946..6426)
DNA (2481bp) protein (827aa)
plasma-membrane proton-efflux P-type ATPase; K01535 H+-transporting ATPase [EC:3.6.3.6] Tax=CG_Mariprof_04
awo:Awo_c27420 plasma-membrane proton-efflux P-type ATPase; K01535 H+-transporting ATPase [EC:3.6.3.6] id=717645 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
plasma-membrane proton-efflux P-type ATPase
scnpilot_p_inoc_scaffold_861_8
Serratia sp. ATCC 39006, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6758..7768)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Serratia sp. ATCC 39006 RepID=V3TLJ6_9ENTR rbh
Conserved hypothetical protein CHP00341
Uncharacterized protein {ECO:0000313|EMBL:ESN61730.1}; TaxID=104623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. ATCC
scnpilot_p_inoc_scaffold_861_9
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7776..10145)
DNA (2370bp) protein (790aa)
putative phosphoketolase (EC:4.1.2.22); K01632 fructose-6-phosphate phosphoketolase [EC:4.1.2.22] Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
putative phosphoketolase (EC:4.1.2.22)
phosphoketolase n=1 Tax=Thiobacillus thioparus RepID=UPI000363A2C1 rbh
scnpilot_p_inoc_scaffold_861_10
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10159..11358)
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=201089 species="Bacteria; Proteobacteria; Deltapro
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036519AE rbh
acetate kinase
scnpilot_p_inoc_scaffold_861_11
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11386..13530)
DNA (2145bp) protein (715aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360C7A4 rbh
glycogen debranching protein GlgX
scnpilot_p_inoc_scaffold_861_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13543..16089)
DNA (2547bp) protein (849aa)
alpha-glucan phosphorylase (EC:2.4.1.1) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
alpha-glucan phosphorylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003677C0E rbh
scnpilot_p_inoc_scaffold_861_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16102..19206)
DNA (3105bp) protein (1035aa)
acriflavine resistance protein B n=1 Tax=Thiobacillus thioparus RepID=UPI000375913C rbh
acriflavin resistance protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
acriflavin resistance protein
scnpilot_p_inoc_scaffold_861_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19218..20360)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003791193 rbh
RND family efflux transporter MFP subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
putative Secretion protein HlyD
scnpilot_p_inoc_scaffold_861_15

Not on your lists

comp(20417..21949)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003609FFF rbh
Putative RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:CBH98940.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage met
NodT family RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_861_16

Not on your lists

comp(22050..23705)
DNA (1656bp) protein (552aa)
phosphoglucomutase (EC:5.4.2.2)
phosphoglucomutase n=1 Tax=Thiobacillus thioparus RepID=UPI0003762DDB rbh
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:EQD56990.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagen
scnpilot_p_inoc_scaffold_861_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24077..24577
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362A430
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_861_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24608..24769
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364547A
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_861_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25222..28863
DNA (3642bp) protein (1214aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003714FF6 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ97409.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteo
scnpilot_p_inoc_scaffold_861_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28965..29363
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378C89A
TraR/DksA family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraR/DksA family transcriptional regulator
scnpilot_p_inoc_scaffold_861_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29412..29717
DNA (306bp) protein (102aa)
30S ribosomal protein S30P / sigma 54 modulation protein id=12493136 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
30S ribosomal protein S30P / sigma 54 modulation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
30S ribosomal protein S30
scnpilot_p_inoc_scaffold_861_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29742..31277
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003768DB3 rbh
hypothetical protein; K07028 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_861_23
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31754..35776
DNA (4023bp) protein (1341aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003717761 rbh
RHS repeat-associated core domain-containing protein rbh
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:AEJ03049.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomona
scnpilot_p_inoc_scaffold_861_24
unknown

Not on your lists

35784..36182
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_861_25
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36233..36568)
DNA (336bp) protein (112aa)
PemK-like protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SZN5_9SYNE
growth inhibitor Tax=GWC2_Geobacteraceae_58_44_curated
PemK-like protein
scnpilot_p_inoc_scaffold_861_26
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36571..36771)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NK34_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO29860.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogen
scnpilot_p_inoc_scaffold_861_27
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36788..37099)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F9E4E7
prophage regulatory ptotein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_861_28
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

37337..38173
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369DB95 rbh
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ABJ86423.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
scnpilot_p_inoc_scaffold_861_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38425..38715)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003725423
selB; selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
translation elongation factor
Displaying 29 items

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