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scnpilot_p_inoc_scaffold_2141

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2141_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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91..1095
DNA (1005bp) protein (335aa)
cell division protein FtsY n=1 Tax=Thiobacillus thioparus RepID=UPI00036C836F
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria;
scnpilot_p_inoc_scaffold_2141_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1092..1754
DNA (663bp) protein (221aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000370645D rbh
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cell division ATP-binding protein FtsE
scnpilot_p_inoc_scaffold_2141_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1751..2659
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FFA3B rbh
cell division protein FtsX; K09811 cell division transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
cell division protein FtsX
scnpilot_p_inoc_scaffold_2141_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2751..3596
DNA (846bp) protein (282aa)
RNA polymerase sigma 70 n=1 Tax=Thiobacillus thioparus RepID=UPI00037CE403 rbh
sigma-70 factor; K03089 RNA polymerase sigma-32 factor Tax=GWE1_Thiobacillus_62_9_curated
sigma-70 factor
scnpilot_p_inoc_scaffold_2141_5
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3783..4622
DNA (840bp) protein (280aa)
alpha/beta hydrolase fold protein; K03928 carboxylesterase [EC:3.1.1.1] id=12494799 bin=THIO_HI species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Carboxylesterase {ECO:0000313|EMBL:GAO34138.1}; EC=3.1.1.1 {ECO:0000313|EMBL:GAO34138.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriph
alpha/beta hydrolase fold protein
scnpilot_p_inoc_scaffold_2141_6
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4645..4887
DNA (243bp) protein (81aa)
acyl carrier protein id=12494800 bin=THIO_HI species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=THIO_HI organism_group=Betaproteobacteria
acyl carrier protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2141_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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4884..6113
DNA (1230bp) protein (410aa)
fabF; 3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] id=12494801 bin=THIO_HI species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
fabF; 3-oxoacyl-ACP synthase
scnpilot_p_inoc_scaffold_2141_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6116..6790
DNA (675bp) protein (225aa)
two component transcriptional regulator id=12494802 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AAZ45936.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechlorom
scnpilot_p_inoc_scaffold_2141_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6771..8153
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechl
sensor histidine kinase id=12494803 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
sensor histidine kinase
scnpilot_p_inoc_scaffold_2141_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8296..9570
DNA (1275bp) protein (425aa)
Outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC id=12494804 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:AAZ45932.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" sour
scnpilot_p_inoc_scaffold_2141_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9567..10754
DNA (1188bp) protein (396aa)
secretion protein HlyD id=12494805 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AAZ45933.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatic
scnpilot_p_inoc_scaffold_2141_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10756..13854
DNA (3099bp) protein (1033aa)
heavy metal efflux pump CzcA id=12494806 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ45934.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" sourc
heavy metal efflux pump CzcA rbh
scnpilot_p_inoc_scaffold_2141_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14034..14180)
DNA (147bp) protein (49aa)
id=12494807 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
Displaying 13 items

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