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scnpilot_p_inoc_scaffold_2997

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2997_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..195
DNA (195bp) protein (65aa)
Probable transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGT9_THIDA
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98154.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
scnpilot_p_inoc_scaffold_2997_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(376..1437)
DNA (1062bp) protein (354aa)
integrase n=1 Tax=Methylotenera mobilis RepID=UPI0003810769 rbh
integrase family protein Tax=GWA2_Curvibacter_64_110_curated
integrase
scnpilot_p_inoc_scaffold_2997_3
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1655..2965)
DNA (1311bp) protein (437aa)
Replication initiation factor n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GL20_NITSI rbh
replication initiation factor
Replication initiation factor {ECO:0000313|EMBL:AEJ01793.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomon
scnpilot_p_inoc_scaffold_2997_4
R_WOR_1_46_20, WOR-1, Bacteria

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comp(3065..3973)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DL96_METS0
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2997_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4189..4560
DNA (372bp) protein (124aa)
QacE-like protein; integron orf n=1 Tax=Janthinobacterium lividum RepID=UPI000289B9F7
QacE {ECO:0000313|EMBL:KGI79240.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
QacE-like protein; integron orf
scnpilot_p_inoc_scaffold_2997_6

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4592..6220
DNA (1629bp) protein (543aa)
Marine sediment metagenome DNA, contig: S01H4_S11612 {ECO:0000313|EMBL:GAH00531.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
scnpilot_p_inoc_scaffold_2997_7
unknown

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comp(6248..7069)
DNA (822bp) protein (274aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2997_8
unknown

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comp(7123..7329)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2997_9
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7891..8358
DNA (468bp) protein (156aa)
fimbrial protein n=1 Tax=Neisseria lactamica RepID=UPI0002E9E421
Fimbrial protein {ECO:0000313|EMBL:EXB87815.1}; TaxID=1310639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumann
Fimbrial protein pilin
scnpilot_p_inoc_scaffold_2997_10
unknown

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comp(8386..8748)
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2997_11
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8916..9263
DNA (348bp) protein (116aa)
transposase IS200 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B326DF
transposase IS200-family protein; K07491 putative transposase Tax=RBG_16_Gammaproteobacteria_57_12_curated
transposase
scnpilot_p_inoc_scaffold_2997_12

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9263..9598
DNA (336bp) protein (112aa)
Prevent-host-death family protein n=1 Tax=mine drainage metagenome RepID=T1B1U8_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EQD62533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prevent-host-death family protein
scnpilot_p_inoc_scaffold_2997_13

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9598..10014
DNA (417bp) protein (139aa)
PilT domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1D7U0_9ZZZZ
PilT domain-containing protein {ECO:0000313|EMBL:EQD77489.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2997_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10004..10477)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003726CC9
putative regulatory protein RecX; K03565 regulatory protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
regulatory protein RecX
scnpilot_p_inoc_scaffold_2997_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10461..10769)
DNA (309bp) protein (103aa)
recombinase RecA n=1 Tax=Thiobacillus thioparus RepID=UPI00037D51CF
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=292415 species="Bacteria; Proteobac
Displaying 15 items

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