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scnpilot_p_inoc_scaffold_4732

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4732_1
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..331)
DNA (330bp) protein (110aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QB11_ACIAP
peptidoglycan-binding lysin domain-containing protein
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:ADX48506.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
scnpilot_p_inoc_scaffold_4732_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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512..1021
DNA (510bp) protein (170aa)
peptide deformylase (EC:3.5.1.88)
peptide deformylase id=12550811 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
peptide deformylase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_4732_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1018..1506
DNA (489bp) protein (163aa)
lipoprotein transmembrane Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4732_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1572..2558
DNA (987bp) protein (329aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=12550810 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_4732_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2614..3240
DNA (627bp) protein (209aa)
AzlC family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I503_9BURK
AzlC family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
AzlC family protein
scnpilot_p_inoc_scaffold_4732_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3237..3572
DNA (336bp) protein (112aa)
branched-chain amino acid transport id=12550808 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
branched-chain amino acid transport Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
branched-chain amino acid transporter
scnpilot_p_inoc_scaffold_4732_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3653..4861
DNA (1209bp) protein (403aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=573060 species="Bacteria;
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAL4_ACIDE
scnpilot_p_inoc_scaffold_4732_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5016..5708
DNA (693bp) protein (231aa)
hypothetical protein id=12550805 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4732_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5705..6259
DNA (555bp) protein (185aa)
hypothetical protein id=12550804 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4732_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6403..7842
DNA (1440bp) protein (480aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] id=12550803 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
pyruvate kinase (EC:2.7.1.40)
scnpilot_p_inoc_scaffold_4732_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7971..9035
DNA (1065bp) protein (355aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ABM39165.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ABM39165.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Fructose-bisphosphate aldolase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VU37_POLNA
scnpilot_p_inoc_scaffold_4732_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9175..10290
DNA (1116bp) protein (372aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHM3_ACIET rbh
scnpilot_p_inoc_scaffold_4732_13
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10348..10452
DNA (105bp) protein (35aa)
NAD(P) transhydrogenase subunit alpha part 2; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
pntAb1; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XBW1_9RALS
Displaying 13 items

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