ggKbase home page

scnpilot_p_inoc_scaffold_8367

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_8367_1
unknown

Not on your lists

1..138
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_8367_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196..1629
DNA (1434bp) protein (478aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVA8_9BURK
rumA; 23S rRNA m(5)U1939 methyltransferase
scnpilot_p_inoc_scaffold_8367_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1639..1992)
DNA (354bp) protein (118aa)
hypothetical protein id=12552981 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_8367_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2077..2778)
DNA (702bp) protein (234aa)
hypothetical protein; K06890 id=12552982 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K06890 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_8367_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2985..3389
DNA (405bp) protein (135aa)
hypothetical protein id=12552983 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_8367_6
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3498..3722)
DNA (225bp) protein (75aa)
Hemin uptake protein {ECO:0000313|EMBL:EWS61595.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
scnpilot_p_inoc_scaffold_8367_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3803..4213)
DNA (411bp) protein (137aa)
biopolymer transport protein ExbD/TolR id=12552986 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_8367_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4216..4932)
DNA (717bp) protein (239aa)
MotA/TolQ/ExbB proton channel Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
MotA/TolQ/ExbB proton channel id=12552987 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
MotA/TolQ/ExbB proton channel
scnpilot_p_inoc_scaffold_8367_9
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4956..5300)
DNA (345bp) protein (115aa)
TonB family protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WMF2_VEREI
TonB family protein
TonB family protein {ECO:0000313|EMBL:ABM58809.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter e
scnpilot_p_inoc_scaffold_8367_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5728..5886)
DNA (159bp) protein (53aa)
BFD domain protein (2Fe-2S)-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRN8_ALIDB
hypothetical protein
BFD domain protein (2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADV00252.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;"
Displaying 10 items

View Taxonomy