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scnpilot_p_inoc_scaffold_2027_2

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 284..496

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type transport system n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 57.0
  • Bit_score: 90
  • Evalue 6.60e-16
TRAP-type transport system {ECO:0000313|EMBL:EIK92164.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 57.0
  • Bit_score: 90
  • Evalue 9.20e-16
TRAP transporter, 4TM/12TM fusion protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 58.0
  • Bit_score: 61
  • Evalue 1.60e-07

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
TTGTCACGATCCCTTCGCACTCCCACGCGCTCGCGCGCCCGCAAGGGCGGCTTCGAGCAGGGCTGGGAAGTCGCCAGCGTCGAGCTCCCCACCGACCGCCCCAGCACGCACTGGTTCTACCTGCCCGCACTGCTGCTGGTGGCGCTGGTCTGGTGGAACCAGGGGCGGCGCATGCGCCCGCGCCTGCGCATGCCGGTGGCAGCCCCAGCATGA
PROTEIN sequence
Length: 71
LSRSLRTPTRSRARKGGFEQGWEVASVELPTDRPSTHWFYLPALLLVALVWWNQGRRMRPRLRMPVAAPA*