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scnpilot_p_inoc_scaffold_4943_5

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(5137..6123)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DBCC3 similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 312.0
  • Bit_score: 431
  • Evalue 9.60e-118
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIF80527.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbasp similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 311.0
  • Bit_score: 430
  • Evalue 2.30e-117
TRAP transporter solute receptor TAXI family protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 311.0
  • Bit_score: 415
  • Evalue 1.20e-113

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGCCCCATACCGACACCACCATCAACCGCCGCAGCTTTGTTCTGGGCTCCTCCTTACTCATTGGCGCGGGTGGGTTCACGCTCTCTCCCGCGGCGCTCGCCCAGCAGCAATTCATCAACGTGCTGACCGGAGGCCAGAGCGGGGTGTATTACCCCATGGGCGTTGCGCTCTCCCAGCTCTACAACAACGTCCTGCCTGCTTCCAAAATCACGGTGCAATCCACCAAGGCTTCCGCCGAGAATCTCAATTTGCTGCAAGCAGGCCGTGGCGAAATCGCCTTTGTTCTGGGCGATGCCTTGTCCGATGCCTGGCTGGGCAATAAAGAGGCGGGCTTTGCAAAGCCCCTGAAGAAATTGCGGGCTGTCGCCGGCATTTACCCCAACTACATCCAGATAGTTGCCAGCGCCGAATCGGGAATCAAGACGCTGGCCGACCTCAAGGGAAAGCGCATTTCGGTTGGCGCGCCCAAATCGGGCACCGAACTCAACGCGCGCACCATTCTCGGTGCTGCAGGGCTGCCTTACAGCGCATTTTCCAAAGTCGAATATCTGCCATTTGGAGAATCGGTCGAACTCATGAAAAACCGCCAGCTGGATGTCACCCTGCAATCCGCCGGCCTGGGTGTCGCCTCCATACGCGACCTGGCCACTTCTGTCCCCATCGTCGTCCTTCCGATACCTGCAGAGATCGTGGAAAAAATCAATGACTCGGCGTACCAAGGCTCGGTCATTCCTGCAAAAACCTATCCAGGCCAGGACGAAGACGTCAAAACGATCGCCATAAAGAACTTCCTGGTTTCCCATGACGGAGTTTCCGATGAAGCCGTCTATGCCATGACCAAAGTCATGTTCGAAAACCTTCCGACCCTGATCGCCGCCAACGCCGCCGCCAAAGGGATCAAGAAAGAAGGCGCCATGTCGGGCACCGGGGTGACTTTTCATCCCGGCGCGCTGAAATACTACAAAGAGATTGGTCTTGCCAAGTAA
PROTEIN sequence
Length: 329
MPHTDTTINRRSFVLGSSLLIGAGGFTLSPAALAQQQFINVLTGGQSGVYYPMGVALSQLYNNVLPASKITVQSTKASAENLNLLQAGRGEIAFVLGDALSDAWLGNKEAGFAKPLKKLRAVAGIYPNYIQIVASAESGIKTLADLKGKRISVGAPKSGTELNARTILGAAGLPYSAFSKVEYLPFGESVELMKNRQLDVTLQSAGLGVASIRDLATSVPIVVLPIPAEIVEKINDSAYQGSVIPAKTYPGQDEDVKTIAIKNFLVSHDGVSDEAVYAMTKVMFENLPTLIAANAAAKGIKKEGAMSGTGVTFHPGALKYYKEIGLAK*