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scnpilot_p_inoc_scaffold_4943_6

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(6382..6981)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVQ5_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 198.0
  • Bit_score: 283
  • Evalue 2.00e-73
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 198.0
  • Bit_score: 283
  • Evalue 5.50e-74
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACS20558.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 198.0
  • Bit_score: 283
  • Evalue 2.70e-73

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAACTTGTACATCGTCGACGACGACGAAGCTGTGCGCCGATCACTCGGCCTGCTGCTTCTTTCGCGCGGACACACCGTGCAGGCGTTCGACTCCGGCGAAGCGTTCCTGGAGAACGCCCACACGGAACACGCCGGGTGCGTCATCCTGGACGTCCGGCTGAACGGCATGAGCGGCGTGCAAGTGTTTGAGGCGCTGCGCGAACAGGCAAGCGCGTTGCTGGTGATTTTTCTCTCCGGCCACGGCGACATTCCGATGGCGGTGCATGCGGTTCGCAATGGCGCCTGGGGCTGGCTGGAAAAGCCGTGCGGCGAAGCCCAGCTCCTTGCAACGGTGGACGAAGCCCTTTCGCGTGCGCGCGATGTGGACCGTGATCGCAAGGCGAGGCAGTCCGCGAGGGCGCTGTGGCTCAAGCTCACGCCGCGCGAGACACAGGTGGCACGCCTTGTTGCCCAAGGGTTTACCAACAAGCGCATCGCTGCCGAGCTGTCGCCGATCGAACTGCGCACGGTAGAGACACACCGCGCCCGTGCGTTTGCAAAACTCGGGCTGACCAACAGCCATGAGCTCGATCGCTTCCTGCGCGAGCACGAACTGTGA
PROTEIN sequence
Length: 200
MNLYIVDDDEAVRRSLGLLLLSRGHTVQAFDSGEAFLENAHTEHAGCVILDVRLNGMSGVQVFEALREQASALLVIFLSGHGDIPMAVHAVRNGAWGWLEKPCGEAQLLATVDEALSRARDVDRDRKARQSARALWLKLTPRETQVARLVAQGFTNKRIAAELSPIELRTVETHRARAFAKLGLTNSHELDRFLREHEL*