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scnpilot_p_inoc_scaffold_4943_7

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(6984..7658)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 212.0
  • Bit_score: 250
  • Evalue 1.70e-63
PAS domain S-box n=1 Tax=Variovorax sp. CF313 RepID=J3CAQ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 212.0
  • Bit_score: 250
  • Evalue 1.20e-63
putative signal transduction histidine kinase, PAS domain-containing similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 218.0
  • Bit_score: 249
  • Evalue 9.90e-64

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GCCTCGACCCTTGCGCATGAGCTGAACCAACCGCTCATGGCCATGAGCAACTATGCCAGCGCGGCCAAGGCTTTCGCGCTGCAAGAAAAAGGGCCGCTGCTGATGGAAAGCCTGGACGAAGCCATCCGGCAGGCCCAACGCAGCGCCGACATCGTCAAACGCATTCGCGGGTTCGTGCACCAGCGCACCGTGGGCGACGAAAGCTGCCAGATGGAATCCATGGTGCAGAACGCGCTGGCTCTGCTGCGGGGGGAAATACGCTCCCGGGGTGCGCGGGTGCACCTGGACTTGGCGCCCGCGCTGCCGCCGGTAGTGGGTGACAGAGTGCTGCTGGAGCAGGTTCTGCTCAATCTGATCCTGAACGGCCTGCAGGCCATGGACCGCACCCCCCGCCCACTGCGCGCAATCGGCATCCAGGCCGAAATGTCGTCCAACCGCCTTGTGGTCCGGATCGCGGATCGGGGTGCGGGTGTGGATCCGGAAATTGCCGACAAGATCTTCGAAGCATTCTTCACCTGCCGTACAGATGGGCTGGGTCTGGGGCTAAGCATTTGTCGCACCATCGCGGAAAGGCATGGTGGTAGTCTGTACTTTTCTTCCCGAGAGGGGGGGGGCACGGTGTTCACCCTGGAACTCGCGGGCGTCACGACCCCCACTCAAATGTCGGGCAGCTGA
PROTEIN sequence
Length: 225
ASTLAHELNQPLMAMSNYASAAKAFALQEKGPLLMESLDEAIRQAQRSADIVKRIRGFVHQRTVGDESCQMESMVQNALALLRGEIRSRGARVHLDLAPALPPVVGDRVLLEQVLLNLILNGLQAMDRTPRPLRAIGIQAEMSSNRLVVRIADRGAGVDPEIADKIFEAFFTCRTDGLGLGLSICRTIAERHGGSLYFSSREGGGTVFTLELAGVTTPTQMSGS*