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scnpilot_p_inoc_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_96_1
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1..429
DNA (429bp) protein (143aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Bordetella holmesii RepID=M5NUS7_9BORD
tRNA threonylcarbamoyl adenosine modification protein YgjD
scnpilot_p_inoc_scaffold_96_2
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(540..1172)
DNA (633bp) protein (211aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ATX9_DELSC
glycerol-3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
scnpilot_p_inoc_scaffold_96_3
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1299..1784)
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Burkholderia glumae RepID=C5AC93_BURGB
aminoacyl-tRNA editing domain protein
scnpilot_p_inoc_scaffold_96_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1799..2743)
DNA (945bp) protein (315aa)
Tyrosine recombinase XerD n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HZ47_BORPD rbh
xerD; site-specific tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petri
scnpilot_p_inoc_scaffold_96_5
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2740..3456)
DNA (717bp) protein (239aa)
Transcriptional regulator n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQH7_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EGI77960.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracili
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_96_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3548..4027
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SYQ1_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ70382.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
scnpilot_p_inoc_scaffold_96_7
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4364..5353)
DNA (990bp) protein (330aa)
Putative secreted protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I7Z9_BORPD rbh
bug21; hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAP41166.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (s
scnpilot_p_inoc_scaffold_96_8
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5522..6661)
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase n=1 Tax=Thauera sp. 63 RepID=N6YBT5_9RHOO
4Fe-4S ferredoxin protein Tax=GWA2_Rhodocyclales_65_20_curated
iron-sulfur cluster binding protein
scnpilot_p_inoc_scaffold_96_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6684..7160
DNA (477bp) protein (159aa)
ATPase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T293_ALCXX
hypothetical protein
ATPase {ECO:0000313|EMBL:KGY28322.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans
scnpilot_p_inoc_scaffold_96_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7124..8557
DNA (1434bp) protein (478aa)
N-acetylmuramoyl-L-alanine amidase AmiC {ECO:0000313|EMBL:KCV66530.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KCV66530.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
N-acetylmuramoyl-L-alanine amidase AmiC n=13 Tax=Bordetella pertussis RepID=V8U2Z1_BORPT rbh
amiC; hypothetical protein
scnpilot_p_inoc_scaffold_96_11
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8739..9383)
DNA (645bp) protein (215aa)
SNARE-like domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X7W3_9BURK rbh
SNARE-like domain protein {ECO:0000313|EMBL:EFF77059.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter pie
DedA protein rbh
scnpilot_p_inoc_scaffold_96_12
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9453..11426
DNA (1974bp) protein (658aa)
DNA mismatch repair protein MutL n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I7Y0_BORPD rbh
mutL; DNA mismatch repair protein
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
scnpilot_p_inoc_scaffold_96_13
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11440..12414
DNA (975bp) protein (325aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X7W1_9BURK rbh
scnpilot_p_inoc_scaffold_96_14
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12528..13592
DNA (1065bp) protein (355aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J119_PSEUL rbh
histidinol-phosphate aminotransferase
scnpilot_p_inoc_scaffold_96_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13685..14734)
DNA (1050bp) protein (350aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000255|HAMAP-Rule:MF_00741}; EC=6.3.3.1 {ECO:0000255|HAMAP-Rule:MF_00741};; AIR synthase {ECO:0000255|HAMAP-Rule:MF_00741}; AIRS {ECO:0000255|HAMAP
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=PUR5_BORPD rbh
scnpilot_p_inoc_scaffold_96_16
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14982..15704
DNA (723bp) protein (241aa)
DnaA regulatory inactivator Hda n=2 Tax=Bordetella holmesii RepID=M5NKL3_9BORD rbh
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:KCB35479.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hi
hda; dnaA regulatory inactivator Hda
scnpilot_p_inoc_scaffold_96_17
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15701..16393
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I5Z7_BORPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP41155.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_96_18
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16390..17790
DNA (1401bp) protein (467aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1532557 species="Bacteria; Proteobacteria;
pcnB; poly(A) polymerase (EC:2.7.7.19)
Poly(A) polymerase I n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHL1_ACHXA rbh
scnpilot_p_inoc_scaffold_96_19
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17787..18275
DNA (489bp) protein (163aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:KCB38075.1}; EC=2.7.6.3 {ECO:0000313|EMBL:KCB38075.1};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteob
2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase n=5 Tax=Bordetella RepID=K0M8F1_BORPB
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
scnpilot_p_inoc_scaffold_96_20
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18435..20585
DNA (2151bp) protein (717aa)
Heavy metal translocating P-type ATPase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTR0_COMTE rbh
Copper-transporting P-type ATPase {ECO:0000313|EMBL:EXU78538.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aq
heavy metal translocating P-type ATPase
scnpilot_p_inoc_scaffold_96_21
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20755..21372
DNA (618bp) protein (206aa)
UPI0003D68FF3 related cluster n=1 Tax=unknown RepID=UPI0003D68FF3
Peptidase S16 {ECO:0000313|EMBL:KGD88180.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
scnpilot_p_inoc_scaffold_96_22
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21377..21991)
DNA (615bp) protein (205aa)
GNAT family acetyltransferase n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N5A2_9PSED
GNAT family acetyltransferase {ECO:0000313|EMBL:EIK96642.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
acetyltransferase, GNAT family
scnpilot_p_inoc_scaffold_96_23
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22056..22946)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QIE1_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW89036.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
scnpilot_p_inoc_scaffold_96_24
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23013..24056
DNA (1044bp) protein (348aa)
3-phosphoglycerate dehydrogenase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QG45_RALPI rbh
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:KDP84865.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp.
3-phosphoglycerate dehydrogenase
scnpilot_p_inoc_scaffold_96_25
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24043..24735
DNA (693bp) protein (231aa)
Demethylmenaquinone methyltransferase n=1 Tax=Pseudomonas sp. GM78 RepID=J3DXL5_9PSED rbh
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EJN35169.1}; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
dimethylmenaquinone methyltransferase
scnpilot_p_inoc_scaffold_96_26
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24778..25758
DNA (981bp) protein (327aa)
LacI family transcriptional regulator n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QLT3_RALPI
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AGW89037.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
scnpilot_p_inoc_scaffold_96_27
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25766..26965
DNA (1200bp) protein (400aa)
CoA-transferase; caib/baif CoA-transferase family (EC:2.8.3.16)
Putative CoA-transferase caiB/baiF CoA-transferase family {ECO:0000313|EMBL:CAQ72456.1}; EC=2.8.3.16 {ECO:0000313|EMBL:CAQ72456.1};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria;
CoA-transferase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035DD3E4 rbh
scnpilot_p_inoc_scaffold_96_28
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26962..27840
DNA (879bp) protein (293aa)
Citrate synthase (si) (EC:2.3.3.1)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000374F4EC rbh
Citrate synthase {ECO:0000313|EMBL:KJK21839.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
scnpilot_p_inoc_scaffold_96_29
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27801..28763)
DNA (963bp) protein (321aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFG77321.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFG77321.1};; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Myco
4-phosphoerythronate dehydrogenase n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P9F5_9MYCO rbh
2-hydroxyacid dehydrogenase
scnpilot_p_inoc_scaffold_96_30
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28760..30124)
DNA (1365bp) protein (455aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T353_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW97179.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
poly-gamma-glutamate biosynthesis protein
Displaying items 1-30 of 221 in total

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