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scnpilot_p_inoc_scaffold_128

Search features with annotation key words

Displaying items 61-90 of 255 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_128_61
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60789..61934
DNA (1146bp) protein (382aa)
Flagellar hook-length control protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WJB6_BORBR
flagellar hook-length control protein; K02414 flagellar hook-length control protein FliK Tax=GWA2_Gallionellales_60_142_curated
fliK; flagellar hook-length control protein
scnpilot_p_inoc_scaffold_128_62
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62067..62609
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035EFDB2
flagellar basal body-associated protein FliL
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:ACB33293.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholod
scnpilot_p_inoc_scaffold_128_63
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62669..63679
DNA (1011bp) protein (337aa)
Flagellar motor switch protein M n=1 Tax=Limnobacter sp. MED105 RepID=A6GTY1_9BURK rbh
fliM; flagellar motor switch protein FliM Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
fliM; flagellar motor switch protein FliM
scnpilot_p_inoc_scaffold_128_64
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63663..64085
DNA (423bp) protein (141aa)
Flagellar motor switch/type III secretory pathway protein FliN n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIG7_THIDA
flagellar motor switch/type III secretory pathway protein FliN
Flagellar motor switch/type III secretory pathway protein FliN {ECO:0000313|EMBL:AAZ97561.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales;
scnpilot_p_inoc_scaffold_128_65
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64093..64428
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000370AA75
flagellar biosynthesis , FliO family protein
Flagellar biosynthesis , FliO family protein {ECO:0000313|EMBL:CDG81891.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;"
scnpilot_p_inoc_scaffold_128_66
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64425..65171
DNA (747bp) protein (249aa)
flagellar biosynthesis protein FliP n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000367F669
flagellar biosynthetic protein FliP; K02419 flagellar biosynthetic protein FliP Tax=GWA2_Gallionellales_60_18_curated
fliP; flagellar biosynthesis protein FliP
scnpilot_p_inoc_scaffold_128_67
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65215..65487
DNA (273bp) protein (91aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEZ1_GALCS
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ Tax=GWA2_Gallionellales_60_142_curated
flagellar biosynthetic protein FliQ
scnpilot_p_inoc_scaffold_128_68
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65498..66271
DNA (774bp) protein (258aa)
Flagellar biosynthetic protein fliR id=1317104 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar biosynthesis protein FliR; K02421 flagellar biosynthetic protein FliR Tax=GWE1_Thiobacillus_62_9_curated
flagellar biosynthetic protein FliR
scnpilot_p_inoc_scaffold_128_69
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66293..67807)
DNA (1515bp) protein (505aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bor
Putative sensor histidine kinase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQ97_BORPD rbh
scnpilot_p_inoc_scaffold_128_70
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67791..68468)
DNA (678bp) protein (226aa)
Two-component response regulatory protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQA0_BORPD rbh
basR; two-component response regulatory protein
Two-component response regulatory protein {ECO:0000313|EMBL:CAP43034.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bord
scnpilot_p_inoc_scaffold_128_71
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68575..69009)
DNA (435bp) protein (145aa)
Biopolymer transport protein ExbD/TolR n=2 Tax=Bordetella holmesii RepID=M5NPC6_9BORD
Transport energizing protein, ExbD/TolR family {ECO:0000313|EMBL:KCB43789.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source
biopolymer transport ExbD/TolR family protein
scnpilot_p_inoc_scaffold_128_72
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69025..69756)
DNA (732bp) protein (244aa)
MotA/TolQ/ExbB proton channel family protein n=2 Tax=Bordetella holmesii RepID=M5NVW1_9BORD rbh
motA/TolQ/ExbB proton channel family protein
Transporter, MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:KAK81242.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetell
scnpilot_p_inoc_scaffold_128_73
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69758..70507)
DNA (750bp) protein (250aa)
Siderophore-mediated iron transport protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QIP5_BORBO
tonB; siderophore-mediated iron transport protein
Siderophore-mediated iron transport protein {ECO:0000313|EMBL:CAJ49730.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bo
scnpilot_p_inoc_scaffold_128_74
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70632..71480)
DNA (849bp) protein (283aa)
Universal stress family protein 3 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVH2_ACHXA
Universal stress protein {ECO:0000313|EMBL:KGD93496.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
universal stress family protein 3
scnpilot_p_inoc_scaffold_128_75
unknown

Not on your lists

71925..72188
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_128_76
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72393..73037)
DNA (645bp) protein (215aa)
Putative glutathione-S-transferase n=7 Tax=Bordetella RepID=K0MH49_BORBM rbh
glutathione-S-transferase
Putative glutathione-S-transferase {ECO:0000313|EMBL:CCJ50341.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
scnpilot_p_inoc_scaffold_128_77
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73053..74003)
DNA (951bp) protein (317aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TTS0_BORBO rbh
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
scnpilot_p_inoc_scaffold_128_78
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74003..74476)
DNA (474bp) protein (158aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Bordetella bronchiseptica RepID=K0MWD0_BORBM
fkpB; FkbP-type peptidyl-prolyl cis-trans isomerase
scnpilot_p_inoc_scaffold_128_79
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74535..75227
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037862B7
RadC-like JAB domain protein {ECO:0000313|EMBL:KCV61503.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronc
radC; DNA repair protein RadC
scnpilot_p_inoc_scaffold_128_80
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75231..76250)
DNA (1020bp) protein (340aa)
gluconolactonase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000368B1F1 rbh
Gluconolactonase {ECO:0000313|EMBL:KFC65746.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
gluconolactonase
scnpilot_p_inoc_scaffold_128_81
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76259..77230)
DNA (972bp) protein (324aa)
3-keto-5-aminohexanoate cleavage protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000310DC5A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ96568.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_128_82
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77245..78021)
DNA (777bp) protein (259aa)
cyclase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FFA9EE rbh
cyclase, putative
Cyclase, putative {ECO:0000313|EMBL:AAV94140.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain A
scnpilot_p_inoc_scaffold_128_83
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78037..79356)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000301572B rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KAJ56335.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" sourc
TRAP C4-dicarboxylate transport system permease DctM
scnpilot_p_inoc_scaffold_128_84
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79353..79925)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E6C5C8
Uncharacterized protein {ECO:0000313|EMBL:KAJ56334.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium m
hypothetical protein
scnpilot_p_inoc_scaffold_128_85
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79946..81001)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E65625 rbh
Extracellular solute-binding protein, family 7
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_128_86
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81073..81771)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F51F40 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EKF42324.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_128_87
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


82224..82460
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F78BAD
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1331279 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pert
scnpilot_p_inoc_scaffold_128_88
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


82485..82655
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=2 Tax=Advenella kashmirensis RepID=I3UBB8_ADVKW
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensi
scnpilot_p_inoc_scaffold_128_89
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82724..83539)
DNA (816bp) protein (272aa)
citrate lyase subunit beta (EC:4.1.3.6)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036CD7D8
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:KCV61757.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sourc
scnpilot_p_inoc_scaffold_128_90
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83536..84747)
DNA (1212bp) protein (404aa)
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEF22622.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEF22622.1};; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae
Formyl-CoA transferase n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AGC9_PSEF1 rbh
Displaying items 61-90 of 255 in total

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