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scnpilot_p_inoc_scaffold_128

Search features with annotation key words

Displaying items 181-210 of 255 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_128_181
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184616..186691
DNA (2076bp) protein (692aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=5082720 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hppA; pyrophosphatase (EC:3.6.1.1)
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_128_182
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(186731..187639)
DNA (909bp) protein (303aa)
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4Y9_9ARCH
5-carboxymethyl-2-hydroxymuconate isomerase
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:BAJ47358.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Ca
scnpilot_p_inoc_scaffold_128_183
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187659..188828)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XV49_ALCXX rbh
mandelate racemase/muconate lactonizing enzyme family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_128_184
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188828..189805)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G377_HERAR
Uncharacterized protein {ECO:0000313|EMBL:KFG69043.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
signal peptide
scnpilot_p_inoc_scaffold_128_185
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189927..190850)
DNA (924bp) protein (308aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Polaromonas sp. CF318 RepID=J3D7K6_9BURK
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EJL86231.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_128_186
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190881..192449)
DNA (1569bp) protein (523aa)
Integral membrane protein MviN n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FEK3_9BURK rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromoba
integral membrane protein
scnpilot_p_inoc_scaffold_128_187
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


192633..192896
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Pusillimonas noertemannii RepID=UPI00031A4B62
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes fa
rpsT; 30S ribosomal protein S20
scnpilot_p_inoc_scaffold_128_188
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193040..193363)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003033416
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71924.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
scnpilot_p_inoc_scaffold_128_189
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193654..194316
DNA (663bp) protein (221aa)
alpha/beta hydrolase n=1 Tax=Acetobacter aceti RepID=UPI0002260128
Uncharacterized protein {ECO:0000313|EMBL:KFL27689.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
alpha/beta hydrolase family protein
scnpilot_p_inoc_scaffold_128_190
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194381..195331
DNA (951bp) protein (317aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
ornithine carbamoyltransferase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002ED75C6 rbh
ornithine carbamoyltransferase
scnpilot_p_inoc_scaffold_128_191
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195496..196722
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Ralstonia sp. PBA RepID=I9BT48_9RALS rbh
scnpilot_p_inoc_scaffold_128_192
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196822..197565
DNA (744bp) protein (248aa)
Glutamine amidotransferase {ECO:0000313|EMBL:AIR51411.1}; EC=6.3.5.2 {ECO:0000313|EMBL:AIR51411.1};; Uncharacterized protein {ECO:0000313|EMBL:EFV86492.1}; TaxID=562971 species="Bacteria; Proteobacter
UPI0003D5AC00 related cluster n=1 Tax=unknown RepID=UPI0003D5AC00
GMP synthase
scnpilot_p_inoc_scaffold_128_193
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197562..198578)
DNA (1017bp) protein (339aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IGA7_BORPD rbh
scnpilot_p_inoc_scaffold_128_194
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198741..199226
DNA (486bp) protein (162aa)
UPF0234 protein PMI40_02275 n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VK38_9BURK
hypothetical protein
UPF0234 protein PMI40_02275 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbasp
scnpilot_p_inoc_scaffold_128_195
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199269..199526)
DNA (258bp) protein (86aa)
XRE family transcriptional regulator n=2 Tax=Burkholderia pseudomallei RepID=I1WR10_BURPE
XRE family transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:AJZ56239.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
scnpilot_p_inoc_scaffold_128_196
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199725..201611)
DNA (1887bp) protein (629aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T438_BORBO rbh
scnpilot_p_inoc_scaffold_128_197
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201628..202533)
DNA (906bp) protein (302aa)
Geranyltranstransferase n=2 Tax=Bordetella holmesii RepID=M5NP67_9BORD rbh
polyprenyl synthetase family protein
Polyprenyl synthetase {ECO:0000313|EMBL:KCB43934.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.
scnpilot_p_inoc_scaffold_128_198
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202538..202807)
DNA (270bp) protein (90aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
exodeoxyribonuclease VII small subunit n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035CF0C2
exodeoxyribonuclease VII small subunit
scnpilot_p_inoc_scaffold_128_199
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203069..204235
DNA (1167bp) protein (389aa)
Ring hydroxylating alpha subunit, catalytic domain protein n=10 Tax=Bordetella pertussis RepID=V8U2X6_BORPT rbh
Ring hydroxylating alpha subunit, catalytic domain protein {ECO:0000313|EMBL:KCB43867.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetel
iron-sulfur protein
scnpilot_p_inoc_scaffold_128_200
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204514..204675
DNA (162bp) protein (54aa)
UPF0391 membrane protein BP1737 n=38 Tax=Bordetella RepID=Y1737_BORPE
hypothetical protein
UPF0391 membrane protein L493_3513 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordet
scnpilot_p_inoc_scaffold_128_201
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204698..205018
DNA (321bp) protein (107aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6B4_AZOSB
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CAL94369.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp
scnpilot_p_inoc_scaffold_128_202
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205233..206114)
DNA (882bp) protein (294aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
Protease HtpX homolog n=38 Tax=Bordetella RepID=HTPX_BORBR rbh
heat shock protein HtpX
scnpilot_p_inoc_scaffold_128_203
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206377..207228
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5NXF7_9BORD
EamA-like transporter family protein {ECO:0000313|EMBL:KCB34931.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel
eamA-like transporter family protein
scnpilot_p_inoc_scaffold_128_204
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

207280..208281
DNA (1002bp) protein (334aa)
Bacterial luciferase-like monooxygenase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PY9_SYMTH rbh
luciferase-like monooxygenase
Bacterial luciferase-like monooxygenase {ECO:0000313|EMBL:BAD40254.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacte
scnpilot_p_inoc_scaffold_128_205
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208318..209100
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AHB75442.1}; EC=1.1.1.30 {ECO:0000313|EMBL:AHB75442.1};; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkhol
3-hydroxybutyrate dehydrogenase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PLF3_9BURK rbh
scnpilot_p_inoc_scaffold_128_206
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209101..210267
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P074_CHRVO rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ58370.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromob
scnpilot_p_inoc_scaffold_128_207
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210273..211964
DNA (1692bp) protein (564aa)
Na/Pi-cotransporter II-related protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0F7_9PROT rbh
Na/Pi cotransporter {ECO:0000313|EMBL:KGM31008.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus M
Na/Pi-cotransporter II-like protein
scnpilot_p_inoc_scaffold_128_208
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211968..212825)
DNA (858bp) protein (286aa)
Putative membrane protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ITV0_BORPD rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP43467.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (s
scnpilot_p_inoc_scaffold_128_209
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212881..213459)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IGK5_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP41952.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_128_210
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213501..214376)
DNA (876bp) protein (292aa)
Dienelactone hydrolase family n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XRD8_ALCXX rbh
Dienelactone hydrolase family
Dienelactone hydrolase family {ECO:0000313|EMBL:CCH07340.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacte
Displaying items 181-210 of 255 in total

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