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scnpilot_p_inoc_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_149_1
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..260)
-----------------
DNA (258bp)
protein (86aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JDF8_BURP8
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
scnpilot_p_inoc_scaffold_149_2
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

395..1981
-----------------
DNA (1587bp)
protein (529aa)
Methyl-accepting chemotaxis sensory transducer with PAS sensor n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IZ86_PSEUL rbh
methyl-accepting chemotaxis sensory transducer with PAS sensor
Methyl-accepting chemotaxis sensory transducer with PAS sensor {ECO:0000313|EMBL:BAK78195.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseu
scnpilot_p_inoc_scaffold_149_3
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2142..3548
-----------------
DNA (1407bp)
protein (469aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:KDD53515.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KDD53515.1};; TaxID=1331242 species="Bacteria; Proteobacteria; Betapro
Probable D-alanyl-D-alanine carboxypeptidase n=3 Tax=Bordetella bronchiseptica RepID=K0MQR8_BORBM rbh
D-alanyl-D-alanine carboxypeptidase
scnpilot_p_inoc_scaffold_149_4
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3679..3990
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GSV8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDM82832.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED
Probable transmembrane protein
scnpilot_p_inoc_scaffold_149_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4001..4414
-----------------
DNA (414bp)
protein (138aa)
Strain DSM n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U7I6_ALCXX
membrane protein
Membrane protein {ECO:0000313|EMBL:AIR53424.1}; Strain DSM {ECO:0000313|EMBL:EFV85102.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromoba
scnpilot_p_inoc_scaffold_149_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4411..4791
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XS33_ALCXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH07379.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
scnpilot_p_inoc_scaffold_149_7
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4827..6380)
-----------------
DNA (1554bp)
protein (518aa)
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000255|HAMAP-Rule:MF_01636}; EC=4.1.1.- {ECO:0000255|HAMAP-Rule:MF_01636};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000255|HAMAP-Rule:MF_016
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=UBID_BORPD
scnpilot_p_inoc_scaffold_149_8
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7010..7945
-----------------
DNA (936bp)
protein (312aa)
Putative transglycosylase n=7 Tax=Bordetella RepID=K0MLV0_BORPB
transglycosylase
Transglycosylase SLT domain protein {ECO:0000313|EMBL:KDD60377.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell
scnpilot_p_inoc_scaffold_149_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7975..9132)
-----------------
DNA (1158bp)
protein (386aa)
Aminotransferase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F7F0_9BURK rbh
Aminotransferase {ECO:0000313|EMBL:KCV62194.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99
aminotransferase
scnpilot_p_inoc_scaffold_149_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9285..10208
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HZQ8_BORPD
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV62273.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
hypothetical protein
scnpilot_p_inoc_scaffold_149_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10279..12600
-----------------
DNA (2322bp)
protein (774aa)
maeB1; malic enzyme (EC:1.1.1.40)
NADP-dependent malic enzyme n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U4P0_ALCXX
NADP-dependent malic enzyme {ECO:0000313|EMBL:EFV86107.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter x
scnpilot_p_inoc_scaffold_149_12
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12635..13831
-----------------
DNA (1197bp)
protein (399aa)
Esterase of the alpha-beta hydrolase superfamily protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CY45_9BURK
alpha/beta hydrolase superfamily esterase
Esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:EIJ48538.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspi
scnpilot_p_inoc_scaffold_149_13
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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13834..14226
-----------------
DNA (393bp)
protein (131aa)
ribonuclease n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037D17C4
Guanyl-specific ribonuclease St {ECO:0000313|EMBL:EGK70681.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methylov
guanine-specific ribonuclease N1 and T1
scnpilot_p_inoc_scaffold_149_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14230..14673
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XS55_ALCXX
FIG00432997: hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH07389.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
scnpilot_p_inoc_scaffold_149_15
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14689..15615)
-----------------
DNA (927bp)
protein (309aa)
Transcriptional regulator, AraC family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CS5_POLSJ
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABE43667.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro
scnpilot_p_inoc_scaffold_149_16
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15668..16144)
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9BQW9_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ02273.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
CBS domain-containing protein
scnpilot_p_inoc_scaffold_149_17
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16164..17885)
-----------------
DNA (1722bp)
protein (574aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KDR34627.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KDR34627.1};; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiac
putative dihydroxy-acid dehydratase (EC:4.2.1.9)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003810B20 rbh
scnpilot_p_inoc_scaffold_149_18
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17914..19365)
-----------------
DNA (1452bp)
protein (484aa)
gabD; Succinate-semialdehyde dehydrogenase [NADP+] (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase [NADP+] {ECO:0000313|EMBL:CCQ75126.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CCQ75126.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiri
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003718C0D rbh
scnpilot_p_inoc_scaffold_149_19
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19375..21285)
-----------------
DNA (1911bp)
protein (637aa)
Acetolactate synthase large subunit n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RVW3_9RHIZ rbh
conserved protein of unknown function[Include thiamine pyrophosphate enzyme, C-terminal TPP binding domain]
Uncharacterized protein {ECO:0000313|EMBL:CCQ75125.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira s
scnpilot_p_inoc_scaffold_149_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21324..22322)
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00038096FC
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
scnpilot_p_inoc_scaffold_149_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22407..23426)
-----------------
DNA (1020bp)
protein (340aa)
putative xanthine dehydrogenase (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8D6_9BRAD rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EFI50821.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
scnpilot_p_inoc_scaffold_149_22
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23423..25330)
-----------------
DNA (1908bp)
protein (636aa)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:ESR27186.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ESR27186.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
putative xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RMD0_9RHIZ rbh
scnpilot_p_inoc_scaffold_149_23
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25323..26234)
-----------------
DNA (912bp)
protein (304aa)
Xanthine dehydrogenase, FAD binding subunit {ECO:0000313|EMBL:ESR27187.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ESR27187.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Xanthine dehydrogenase, FAD binding subunit n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R5F9_9RHIZ
putative xanthine dehydrogenase, FAD-binding subunit
scnpilot_p_inoc_scaffold_149_24
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26246..27385)
-----------------
DNA (1140bp)
protein (380aa)
Alcohol dehydrogenase superfamily, zinc-containing n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TN88_9RHIZ rbh
Alcohol dehydrogenase superfamily, zinc-containing {ECO:0000313|EMBL:ESR27188.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source=
putative L-threonine 3-dehydrogenase
scnpilot_p_inoc_scaffold_149_25
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27626..28153
-----------------
DNA (528bp)
protein (176aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxaloba
Superoxide dismutase [Cu-Zn] n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GA05_9BURK
putative copper/zinc-superoxide dismutase
scnpilot_p_inoc_scaffold_149_26
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28283..29026)
-----------------
DNA (744bp)
protein (248aa)
RNA methyltransferase, RsmE family protein (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1247649 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Bordetella holmesii H558 RepID=M5P8J3_9BORD rbh
scnpilot_p_inoc_scaffold_149_27
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29149..31197
-----------------
DNA (2049bp)
protein (683aa)
Transketolase {ECO:0000313|EMBL:KGD89956.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KGD89956.1};; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobac
tktA; transketolase (EC:2.2.1.1)
TktA protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HZP3_BORPD rbh
scnpilot_p_inoc_scaffold_149_28
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31256..32266
-----------------
DNA (1011bp)
protein (337aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Glyceraldehyde-3-phosphate dehydrogenase n=5 Tax=Bordetella RepID=K0MH18_BORPB rbh
scnpilot_p_inoc_scaffold_149_29
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32269..33471
-----------------
DNA (1203bp)
protein (401aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1331202 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QKU3_BORBO rbh
scnpilot_p_inoc_scaffold_149_30
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33557..34924
-----------------
DNA (1368bp)
protein (456aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:CBW75936.1};; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
Pyruvate kinase n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AKX9_BURRH
Displaying items 1-30 of 272 in total

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