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scnpilot_p_inoc_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_216_1
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..122
-----------------
DNA (120bp)
protein (40aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=4 Tax=cellular organisms RepID=A9BN42_DELAS
scnpilot_p_inoc_scaffold_216_2
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171..503
-----------------
DNA (333bp)
protein (111aa)
Cell division protein FtsB n=1 Tax=Herbaspirillum sp. CF444 RepID=J2UC62_9BURK
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Ox
Septum formation initiator
scnpilot_p_inoc_scaffold_216_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(512..1189)
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DC4747
putative periplasmic protein
Putative periplasmic protein {ECO:0000313|EMBL:CDM23613.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
scnpilot_p_inoc_scaffold_216_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1328..2251)
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000314CB1D
nahR1; putative LysR-type transcriptional regulator NahR Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_216_5
Gluconacetobacter sp. SXCC-1, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2365..3201
-----------------
DNA (837bp)
protein (279aa)
Alpha-ketoglutarate-dependent 2-4-dichlorophenoxyacetate dioxygenase n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S9Q0_9PROT
Alpha-ketoglutarate-dependent 2-4-dichlorophenoxyacetate dioxygenase {ECO:0000313|EMBL:EGG76529.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobactera
taurine catabolism dioxygenase TauD/TfdA
scnpilot_p_inoc_scaffold_216_6
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3216..4187
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA23_ALIDK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP86007.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="
Tricarboxylate transport protein TctC
scnpilot_p_inoc_scaffold_216_7
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4209..5135)
-----------------
DNA (927bp)
protein (309aa)
33 kDa chaperonin n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F5X6_9BURK rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=477184 species="Bacteria; Proteobacteria; Bet
hslO; 33 kDa chaperonin
scnpilot_p_inoc_scaffold_216_8
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5204..6031
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9KXI6_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:KGC03659.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;"
hypothetical protein
scnpilot_p_inoc_scaffold_216_9
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5961..7649)
-----------------
DNA (1689bp)
protein (563aa)
Acetyl-CoA synthetase n=2 Tax=Bordetella holmesii RepID=M5NWZ8_9BORD
AMP-binding enzyme family protein
AMP-binding enzyme {ECO:0000313|EMBL:KAK81659.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H8
scnpilot_p_inoc_scaffold_216_10
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7837..8769
-----------------
DNA (933bp)
protein (311aa)
alpha/beta hydrolase n=1 Tax=Janthinobacterium lividum RepID=UPI000289966F
Alpha/beta hydrolase {ECO:0000313|EMBL:EZP40133.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium
hydrolase
scnpilot_p_inoc_scaffold_216_11
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8754..9596
-----------------
DNA (843bp)
protein (281aa)
phosphoesterase n=1 Tax=Herbaspirillum lusitanum RepID=UPI00037A22E3 rbh
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:EJL82316.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacter
phosphoesterase PHP, N-terminal
scnpilot_p_inoc_scaffold_216_12
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9602..10165
-----------------
DNA (564bp)
protein (188aa)
Transcription elongation factor GreB n=1 Tax=Achromobacter piechaudii HLE RepID=J4YM41_9BURK rbh
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteoba
Transcription elongation factor GreB
scnpilot_p_inoc_scaffold_216_13
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10174..12432)
-----------------
DNA (2259bp)
protein (753aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L065_BORA1 rbh
RelA/SpoT family protein {ECO:0000313|EMBL:KCB40630.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 51
spoT; guanosine-3', 5'-bis(diphosphate)3'-pyrophosphohydrolase
scnpilot_p_inoc_scaffold_216_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12526..12729)
-----------------
DNA (204bp)
protein (68aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=11 Tax=Bordetella RepID=RPOZ_BORA1
scnpilot_p_inoc_scaffold_216_15
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12765..13406)
-----------------
DNA (642bp)
protein (214aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T752_ALCXX
scnpilot_p_inoc_scaffold_216_16
unknown

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comp(13433..13540)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_216_17
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13563..14255)
-----------------
DNA (693bp)
protein (231aa)
Toluene tolerance, Ttg2 family protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4J7T0_9BURK
Toluene tolerance protein Ttg2D {ECO:0000313|EMBL:KCB45735.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hi
toluene tolerance, Ttg2 family protein
scnpilot_p_inoc_scaffold_216_18
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14432..16288
-----------------
DNA (1857bp)
protein (619aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036CCD24 rbh
Peptidase {ECO:0000313|EMBL:KJK25782.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
putative peptidase
scnpilot_p_inoc_scaffold_216_19
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16293..16934)
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R0Q5_9PSED
DsbA-like protein {ECO:0000313|EMBL:EFF73595.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii
thioredoxin domain-containing protein, DsbA family
scnpilot_p_inoc_scaffold_216_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17043..18005
-----------------
DNA (963bp)
protein (321aa)
Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=I4K1Q9_PSEFL rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EIK58649.1}; TaxID=1038923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
scnpilot_p_inoc_scaffold_216_21
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17996..19378)
-----------------
DNA (1383bp)
protein (461aa)
Nucleotide sugar dehydrogenase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIC1_9BURK
UDP-glucose 6-dehydrogenase Tax=CG_Beta_01
UDP-glucose 6-dehydrogenase
scnpilot_p_inoc_scaffold_216_22
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19453..20523)
-----------------
DNA (1071bp)
protein (357aa)
ABC transporter ATP-binding protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R0N7_RALPI rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGW93952.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstoni
scnpilot_p_inoc_scaffold_216_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20763..21776
-----------------
DNA (1014bp)
protein (338aa)
peptidase S1 and S6, chymotrypsin/Hap; K01362 [EC:3.4.21.-] Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036B60A8 rbh
2-alkenal reductase
scnpilot_p_inoc_scaffold_216_24
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21797..22813
-----------------
DNA (1017bp)
protein (339aa)
ATPase AAA n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QSQ6_RALPI rbh
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AGW93954.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
scnpilot_p_inoc_scaffold_216_25
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22788..23783
-----------------
DNA (996bp)
protein (332aa)
ATPase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003654391 rbh
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
scnpilot_p_inoc_scaffold_216_26
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23800..24852
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037D9A2D rbh
von Willebrand factor A
von Willebrand factor A {ECO:0000313|EMBL:AGW93956.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
scnpilot_p_inoc_scaffold_216_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24934..25854
-----------------
DNA (921bp)
protein (307aa)
Polyphosphate kinase 2, PA0141 family n=1 Tax=Variovorax sp. CF313 RepID=J3CF28_9BURK
Polyphosphate kinase 2, PA0141 family {ECO:0000313|EMBL:EJL70379.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
hypothetical protein
scnpilot_p_inoc_scaffold_216_28
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25921..26244
-----------------
DNA (324bp)
protein (108aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D8A3_COMTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFI60779.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_216_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26269..27195)
-----------------
DNA (927bp)
protein (309aa)
Regulatory protein LysR n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1B8_ALIDB
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO24793.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
scnpilot_p_inoc_scaffold_216_30
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27290..28240
-----------------
DNA (951bp)
protein (317aa)
dihydrodipicolinate synthetase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395912B rbh
dihydrodipicolinate synthetase
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ABM31984.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citr
Displaying items 1-30 of 141 in total

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