ggKbase home page

scnpilot_p_inoc_scaffold_235

Search features with annotation key words

Displaying items 91-120 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_235_91
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95783..96700
DNA (918bp) protein (306aa)
cysM; cysteine synthase B (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; B
Cysteine synthase B n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVQ8_ACHXA rbh
scnpilot_p_inoc_scaffold_235_92
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96673..97905)
DNA (1233bp) protein (411aa)
mltB; membrane-bound lytic murein transglycosylase B (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase B {ECO:0000313|EMBL:CAP42237.1}; EC=3.2.1.- {ECO:0000313|EMBL:CAP42237.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Membrane-bound lytic murein transglycosylase B n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJK2_BORPD rbh
scnpilot_p_inoc_scaffold_235_93
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97965..98912
DNA (948bp) protein (316aa)
Histone deacetylase family {ECO:0000313|EMBL:EFF76484.1}; EC=3.5.1.48 {ECO:0000313|EMBL:EFF76484.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
Histone deacetylase family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X9M3_9BURK rbh
Deacetylase
scnpilot_p_inoc_scaffold_235_94
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99056..99805
DNA (750bp) protein (250aa)
Electron transfer flavoprotein beta-subunit n=4 Tax=Bordetella RepID=K4QHX9_BORBO rbh
etfB; electron transfer flavoprotein subunit beta
Electron transfer flavoprotein beta-subunit {ECO:0000313|EMBL:CCN24082.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="B
scnpilot_p_inoc_scaffold_235_95
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99808..100737
DNA (930bp) protein (310aa)
Electron transfer flavoprotein alpha-subunit n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U474_ALCXX rbh
Electron transfer flavoprotein alpha-subunit {ECO:0000313|EMBL:EFV86225.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source
electron transfer flavoprotein subunit beta
scnpilot_p_inoc_scaffold_235_96
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100843..102639
DNA (1797bp) protein (599aa)
Acyl-CoA dehydrogenase n=2 Tax=Bordetella holmesii RepID=M5NPQ1_9BORD rbh
Acyl-CoA dehydrogenase N-terminal domain protein {ECO:0000313|EMBL:KCB40359.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sour
acyl-CoA dehydrogenase, N-terminal domain protein
scnpilot_p_inoc_scaffold_235_97
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102653..103270)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IM25_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP42656.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_235_98
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103497..104141
DNA (645bp) protein (215aa)
Peroxidase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QTF5_9BURK rbh
Peroxidase {ECO:0000313|EMBL:ETF02289.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
antioxidant protein
scnpilot_p_inoc_scaffold_235_99
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104220..104627
DNA (408bp) protein (136aa)
Putative membrane protein n=9 Tax=Bordetella RepID=J7REC9_BORP1
GntR family transcriptional regulator {ECO:0000313|EMBL:KGY25237.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcali
hypothetical protein
scnpilot_p_inoc_scaffold_235_100
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104628..105593)
DNA (966bp) protein (322aa)
Transcriptional regulator of cysteine biosynthesis and aliphatic sulfonates utilization LysR family n=3 Tax=Ralstonia RepID=D8NU61_RALSL rbh
cbl; transcriptional regulator of cysteine biosynthesis and aliphatic sulfonates utilization; LysR family
Transcriptional regulator of cysteine biosynthesis and aliphatic sulfonates utilization LysR family {ECO:0000313|EMBL:CCA82342.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; B
scnpilot_p_inoc_scaffold_235_101
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105842..106864
DNA (1023bp) protein (341aa)
sulfate transporter subunit n=1 Tax=Bordetella holmesii RepID=UPI000314D194 rbh
Sulfate-binding protein {ECO:0000313|EMBL:KCB37775.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-2
sulfate ABC transporter, sulfate-binding family protein
scnpilot_p_inoc_scaffold_235_102
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106861..107751
DNA (891bp) protein (297aa)
Sulfate transport system permease protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJL5_BORPD rbh
cysT; sulfate transport system permease
Sulfate transport system permease protein {ECO:0000313|EMBL:CAP42244.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bord
scnpilot_p_inoc_scaffold_235_103
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107748..108647
DNA (900bp) protein (300aa)
Sulfate ABC transporter permease CysW n=1 Tax=Achromobacter piechaudii HLE RepID=J4YPE2_9BURK rbh
Sulfate ABC transporter permease CysW {ECO:0000313|EMBL:EJO30801.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
Sulfate transport system permease protein CysW
scnpilot_p_inoc_scaffold_235_104
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108670..109728
DNA (1059bp) protein (353aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701, ECO:0000313|EMBL:CDS54915.1};; Sulfate-transporting ATPase {ECO:000
Sulfate transport ATP-binding protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4QRW0_9BURK rbh
ABC type sulfate/molybdate transport systems, ATP-binding protein
scnpilot_p_inoc_scaffold_235_105
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109732..110478
DNA (747bp) protein (249aa)
cysH; phosphoadenosine phosphosulfate reductase (EC:1.8.4.10)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS
Phosphoadenosine phosphosulfate reductase n=1 Tax=Achromobacter piechaudii HLE RepID=J4J7J7_9BURK rbh
scnpilot_p_inoc_scaffold_235_106
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110482..111396
DNA (915bp) protein (305aa)
cysD; sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732, ECO:0000313|EMBL:CAP42248.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteri
Sulfate adenylyltransferase subunit 2 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJM2_BORPD rbh
scnpilot_p_inoc_scaffold_235_107
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111396..112715
DNA (1320bp) protein (440aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
cysN; sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F8W3_9BURK rbh
scnpilot_p_inoc_scaffold_235_108
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112723..113109)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000362CE1F
Uncharacterized protein {ECO:0000313|EMBL:GAD22162.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_235_109
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113106..115253)
DNA (2148bp) protein (716aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" sou
ATP-dependent DNA helicase PcrA n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W1Y1_9BURK rbh
uvrD/REP helicase family protein
scnpilot_p_inoc_scaffold_235_110
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115304..116368)
DNA (1065bp) protein (355aa)
Outer membrane protein (Porin) n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K4J1_CUPNH rbh
Porin {ECO:0000313|EMBL:EYS84947.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
outer membrane protein (porin)
scnpilot_p_inoc_scaffold_235_111
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116466..117461)
DNA (996bp) protein (332aa)
Extra-cytoplasmic solute receptor n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SHY1_9BURK rbh
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:EHP37906.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavi
hypothetical protein
scnpilot_p_inoc_scaffold_235_112
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117660..118379
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR-family n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K4I8_CUPNH rbh
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EYS84944.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
scnpilot_p_inoc_scaffold_235_113
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118383..119249)
DNA (867bp) protein (289aa)
putative carboxylesterase (EC:3.1.1.-) rbh
Putative carboxylesterase {ECO:0000313|EMBL:CAJ95088.1}; EC=3.1.1.- {ECO:0000313|EMBL:CAJ95088.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
Putative carboxylesterase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K4I6_CUPNH rbh
scnpilot_p_inoc_scaffold_235_114
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119369..120505
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJM6_BORPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP42250.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_235_115
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120513..120959)
DNA (447bp) protein (149aa)
UPI0003D59DB1 related cluster n=1 Tax=unknown RepID=UPI0003D59DB1
putative inner membrane protein
Uncharacterised protein {ECO:0000313|EMBL:CKG93245.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxy
scnpilot_p_inoc_scaffold_235_116
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


121085..121345
DNA (261bp) protein (87aa)
30S ribosomal protein S16 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HIR9_ACHXA
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xy
scnpilot_p_inoc_scaffold_235_117
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121350..121961
DNA (612bp) protein (204aa)
Ribosome maturation factor RimM n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XAL4_9BURK
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
scnpilot_p_inoc_scaffold_235_118
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121996..122781
DNA (786bp) protein (262aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltr
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Bordetella RepID=TRMD_BORBR rbh
scnpilot_p_inoc_scaffold_235_119
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


122904..123287
DNA (384bp) protein (128aa)
50S ribosomal protein L19 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D4EBF
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandor
scnpilot_p_inoc_scaffold_235_120
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123412..124194
DNA (783bp) protein (261aa)
Uncharacterized protein n=31 Tax=Bordetella RepID=Q7W9T8_BORPA
hypothetical protein
NUDIX domain protein {ECO:0000313|EMBL:KCB40403.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;
Displaying items 91-120 of 138 in total

View Taxonomy