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scnpilot_p_inoc_scaffold_235_117

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 121350..121961

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XAL4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 203.0
  • Bit_score: 183
  • Evalue 2.20e-43
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 212.0
  • Bit_score: 188
  • Evalue 2.50e-45
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 212.0
  • Bit_score: 188
  • Evalue 1.20e-44

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGGTGCCCGCCGTGTCCACGGTGTCCGGTAGCGATCCCGCCCTTCCCGCCGACCTCGTCGAGGTCGGGCATGTGGCGGAGGCCTTTGGCGTGCGCGGCGGTCTCAAGGTCCAGCCGTACTCGGCCCAGTCCGAAGCCTTGTTGGGCAGCCGCGCATGGTGGCTGCGCAAGGGCACGGAAGTGCGCCGTATCGAAGTGGCCGACGCCAAGCGCCATGGCGCGGTGGTGACGGTCGCTTTTCCCGGCGTGTCCGACCGGGACCAGGCCCTGGCCTGGAAGGGTTGGACGGTGCTGGTGCCGCGCAGTCAGTTCCCCCGGCCCGCCGAAGGCGAGTTCTATTGGGTGGACCTGATCGGCTGCGAGTTGACGGGCAAGAATGACTCGGACCAGGAAGTCGTCCTGGGCACGGTGTCGGAAGTCAGCGACAACGGGGTGCATGCGATCCTGCACGTGGCCTGTGTCGAACCCGTGGCTCCCGGCCAGCCGACGCAGCCGCTGCTCGATGCGCGTGGCAGGCAGCGCGAGACCCTGGTGCCTTTCGTCGACGCGTATATCCGTGGTGTCGATCTGGACGCCCGGCGCATAGACAGCGATTGGCCCGAGGGGTTCTGA
PROTEIN sequence
Length: 204
VVPAVSTVSGSDPALPADLVEVGHVAEAFGVRGGLKVQPYSAQSEALLGSRAWWLRKGTEVRRIEVADAKRHGAVVTVAFPGVSDRDQALAWKGWTVLVPRSQFPRPAEGEFYWVDLIGCELTGKNDSDQEVVLGTVSEVSDNGVHAILHVACVEPVAPGQPTQPLLDARGRQRETLVPFVDAYIRGVDLDARRIDSDWPEGF*