ggKbase home page

scnpilot_p_inoc_scaffold_343

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_343_1
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131..1408
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQH9_ACHXA
Membrane protein {ECO:0000313|EMBL:KGY27803.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xy
hypothetical protein
scnpilot_p_inoc_scaffold_343_2
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1573..1917
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TJ30_BORBO
Zinc ribbon domain protein {ECO:0000313|EMBL:KCB35171.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii
hypothetical protein
scnpilot_p_inoc_scaffold_343_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1955..2554
DNA (600bp) protein (200aa)
Transporter n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XNK0_ALCXX rbh
membrane protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CKI24770.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligene
scnpilot_p_inoc_scaffold_343_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2631..4430
DNA (1800bp) protein (600aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AEI16483.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AEI16483.1};; TaxID=94624 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Bordetella petrii RepID=I1SZ75_9BORD rbh
scnpilot_p_inoc_scaffold_343_5
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4529..5152)
DNA (624bp) protein (208aa)
Transcriptional regulator n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HA60_PSEAC rbh
Transcriptional regulator {ECO:0000313|EMBL:KHA78734.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
HTH domain protein
scnpilot_p_inoc_scaffold_343_6
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5327..6433
DNA (1107bp) protein (369aa)
RND transporter MFP subunit n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002E5D8E4
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CDG80842.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;"
scnpilot_p_inoc_scaffold_343_7
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6447..9533
DNA (3087bp) protein (1029aa)
Probable RND efflux transporter n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6UZP2_PSEA7 rbh
Multidrug efflux pump {ECO:0000313|EMBL:BAO33329.1}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescen
multidrug efflux pump
scnpilot_p_inoc_scaffold_343_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9544..10956
DNA (1413bp) protein (471aa)
Outer membrane protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6UZP1_PSEA7 rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:ABR86275.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin
scnpilot_p_inoc_scaffold_343_9
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10953..12362
DNA (1410bp) protein (470aa)
MFS transporter n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029B13C3 rbh
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIL62132.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
scnpilot_p_inoc_scaffold_343_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12373..12801)
DNA (429bp) protein (143aa)
glyoxalase n=1 Tax=Pseudomonas geniculata RepID=UPI000299D82E
glyoxalase
Glyoxalase family protein {ECO:0000313|EMBL:EED39854.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotropho
scnpilot_p_inoc_scaffold_343_11
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12880..13761)
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus sp. WS RepID=UPI00036AE16D rbh
LysR family transcriptional regulator
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22100.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_343_12
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13889..14311
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00030A5640
dioxygenase/Glyoxalase, bleomycin resistance protein
Dioxygenase/Glyoxalase, bleomycin resistance protein {ECO:0000313|EMBL:EKZ98840.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.
scnpilot_p_inoc_scaffold_343_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14362..14730
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFD5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66728.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
scnpilot_p_inoc_scaffold_343_14
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14825..15385)
DNA (561bp) protein (187aa)
NADPH-dependent FMN reductase n=1 Tax=Burkholderia kururiensis RepID=UPI00034C9F62
NADPH-dependent FMN reductase family protein
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AIP66164.1}; TaxID=57975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" s
scnpilot_p_inoc_scaffold_343_15
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15527..16408
DNA (882bp) protein (294aa)
Putative endonuclease/exonuclease/phosphatase family protein n=7 Tax=Bordetella RepID=K0MAD2_BORPB rbh
endonuclease/exonuclease/phosphatase family protein
Putative endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:CCN20903.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordet
scnpilot_p_inoc_scaffold_343_16
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16400..17752)
DNA (1353bp) protein (451aa)
Putative transport protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R604_9DELT rbh
Putative transport protein {ECO:0000313|EMBL:EPX64418.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_343_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17791..18573)
DNA (783bp) protein (261aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4
Peptidase M15D, vanX D-ala-D-ala dipeptidase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J6N0_COMT2
peptidase M15D, vanX D-ala-D-ala dipeptidase
scnpilot_p_inoc_scaffold_343_18
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18830..19390
DNA (561bp) protein (187aa)
Predicted membrane protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SG16_HAHCH
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:ABC30408.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (st
scnpilot_p_inoc_scaffold_343_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19406..20299)
DNA (894bp) protein (298aa)
Amidohydrolase 2 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKH8_VARPS
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ACS17276.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain
scnpilot_p_inoc_scaffold_343_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20296..20727)
DNA (432bp) protein (144aa)
Putative translation initiation inhibitor,endoribonuclease n=1 Tax=blood disease bacterium R229 RepID=G2ZRY7_9RALS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative translation initiation inhibitor, endoribonuclease
scnpilot_p_inoc_scaffold_343_21
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20780..21160)
DNA (381bp) protein (127aa)
Predicted protein n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZX00_9ACTO
Cupin {ECO:0000313|EMBL:KJE54078.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
scnpilot_p_inoc_scaffold_343_22
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21157..22119)
DNA (963bp) protein (321aa)
MFS transporter n=1 Tax=Cupriavidus sp. WS RepID=UPI00036C22D3
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:AAZ63022.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
scnpilot_p_inoc_scaffold_343_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

22342..23061
DNA (720bp) protein (240aa)
GntR family transcriptional regulator n=1 Tax=Pseudomonas tolaasii RepID=UPI0002D40E04
regulator PutR for proline utilization, GntR family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_343_24
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23182..25140
DNA (1959bp) protein (653aa)
ushA; 5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase n=1 Tax=Achromobacter piechaudii HLE RepID=J4Y649_9BURK
Metallophosphatase {ECO:0000313|EMBL:KGE00066.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;
scnpilot_p_inoc_scaffold_343_25
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25566..25997)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQQ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJN02966.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
hypothetical protein
scnpilot_p_inoc_scaffold_343_26
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26473..26652
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CCL2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJN02964.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
scnpilot_p_inoc_scaffold_343_27
unknown

Not on your lists

26753..26917
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_343_28
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26997..28106
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VAN1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJN02962.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
scnpilot_p_inoc_scaffold_343_29
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28163..28735
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQQ3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJN02961.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
scnpilot_p_inoc_scaffold_343_30
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28985..29476
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VS44_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJN02960.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sour
hypothetical protein
Displaying items 1-30 of 104 in total

View Taxonomy