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scnpilot_p_inoc_scaffold_443

Search features with annotation key words

Displaying items 31-60 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_443_31
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30486..31691)
DNA (1206bp) protein (402aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32)
Amidohydrolase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E229_9BURK rbh
Amidohydrolase {ECO:0000313|EMBL:EKU83485.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
scnpilot_p_inoc_scaffold_443_32
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31864..33027
DNA (1164bp) protein (388aa)
zinc_binding aminopeptidase; transmembrane protein (EC:3.4.11.-)
Putative zinc_binding aminopeptidase putative transmembrane protein {ECO:0000313|EMBL:CAQ70676.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAQ70676.1};; TaxID=164546 species="Bacteria; Proteobacteria; Betaprote
aminopeptidase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037FB9CE rbh
scnpilot_p_inoc_scaffold_443_33
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33067..34761
DNA (1695bp) protein (565aa)
fadD; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid-CoA ligase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CRH1_9BURK rbh
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:EIJ46214.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbas
scnpilot_p_inoc_scaffold_443_34
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34831..36186
DNA (1356bp) protein (452aa)
Phospholipase A1 precursor (EC:3.1.1.32 3.1.1.4) rbh
Phospholipase A1 family protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SUX8_ALCXX rbh
Phospholipase A1 {ECO:0000313|EMBL:KCB40990.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
scnpilot_p_inoc_scaffold_443_35
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36202..37062)
DNA (861bp) protein (287aa)
suhB1; inositol-1-monophosphatase 1 (EC:3.1.3.25)
Inositol-1-monophosphatase 1 {ECO:0000313|EMBL:ADP14164.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ADP14164.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Inositol-1-monophosphatase 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HGG4_ACHXA rbh
scnpilot_p_inoc_scaffold_443_36
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37128..39020
DNA (1893bp) protein (631aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XKN2_ALCXX rbh
FAD-dependent cmnm(5)s(2)U34 oxidoreductase rbh
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein
scnpilot_p_inoc_scaffold_443_37
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39354..41582
DNA (2229bp) protein (743aa)
Putative glycoside hydrolase (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KVK1_BORA1 rbh
glycoside hydrolase
Putative glycoside hydrolase {ECO:0000313|EMBL:CAJ50465.1}; Flags: Fragment;; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
scnpilot_p_inoc_scaffold_443_38
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(41735..42553)
DNA (819bp) protein (273aa)
Lipoprotein NlpE n=1 Tax=Escherichia coli 2722950 RepID=N2FGW3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE03165.1}; Flags: Precursor;; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;"
scnpilot_p_inoc_scaffold_443_39
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42690..43544
DNA (855bp) protein (285aa)
pilD; prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
pilD; bifunctional leader peptidase/N-methyltransferase transmembrane protein (EC:2.1.1.-)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IW83_HERSS rbh
scnpilot_p_inoc_scaffold_443_40
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43538..44182
DNA (645bp) protein (215aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1007105 species="Bacteria; P
Dephospho-CoA kinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR56_PUSST
dephospho-CoA kinase
scnpilot_p_inoc_scaffold_443_41
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44198..45154)
DNA (957bp) protein (319aa)
Extra-cytoplasmic solute receptor n=2 Tax=Burkholderiaceae RepID=R7XGK1_9RALS rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS85141.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="C
extra-cytoplasmic solute receptor
scnpilot_p_inoc_scaffold_443_42
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45280..46245
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR-family n=2 Tax=Burkholderiaceae RepID=Q0K3Z3_CUPNH
LysR family transcriptional regulator {ECO:0000313|EMBL:EYS85139.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_443_43
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46366..47169
DNA (804bp) protein (268aa)
Cell division protein ZapD n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XM34_ALCXX
hypothetical protein
Cell division protein ZapD {ECO:0000256|HAMAP-Rule:MF_01092, ECO:0000256|SAAS:SAAS00004483}; Z ring-associated protein D {ECO:0000256|HAMAP-Rule:MF_01092}; TaxID=562971 species="Bacteria; Proteobacter
scnpilot_p_inoc_scaffold_443_44
unknown

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comp(47195..47341)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_443_45
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47425..48333)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F9E2_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK65207.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
putative LysR-family transcriptional regulator
scnpilot_p_inoc_scaffold_443_46
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48452..49600
DNA (1149bp) protein (383aa)
Salicylate 1-monooxygenase (EC:1.14.13.1); K00480 salicylate hydroxylase [EC:1.14.13.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Salicylate 1-monooxygenase (EC:1.14.13.1)
salicylate 1-monooxygenase n=1 Tax=Rhizobium gallicum RepID=UPI000376BD17
scnpilot_p_inoc_scaffold_443_47
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49664..50626
DNA (963bp) protein (321aa)
MFS transporter n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVY0_9BURK
MFS transporter {ECO:0000313|EMBL:ETF03154.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
scnpilot_p_inoc_scaffold_443_48
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50681..51811)
DNA (1131bp) protein (377aa)
Bifunctional DGTP-pyrophosphohydrolase/thiamine phosphate synthase {ECO:0000313|EMBL:CAP40871.1}; EC=2.5.1.3 {ECO:0000313|EMBL:CAP40871.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteob
Bifunctional DGTP-pyrophosphohydrolase/thiamine phosphate synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I1K3_BORPD
mutT; hypothetical protein
scnpilot_p_inoc_scaffold_443_49
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51935..52831)
DNA (897bp) protein (299aa)
Putative ATP/GTP-binding protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XM21_ALCXX rbh
putative ATP/GTP-binding protein
Putative ATP/GTP-binding protein {ECO:0000313|EMBL:CCH05581.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromoba
scnpilot_p_inoc_scaffold_443_50
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52934..54364)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4TBU4_BORBO rbh
HipA-like C-terminal domain protein {ECO:0000313|EMBL:KCV64531.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell
hypothetical protein
scnpilot_p_inoc_scaffold_443_51
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54374..54715)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MB55_BORPB
XRE family transcriptional regulator {ECO:0000313|EMBL:KJK21449.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae b
hypothetical protein
scnpilot_p_inoc_scaffold_443_52
unknown

Not on your lists

comp(54833..54940)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_443_53
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54982..56208)
DNA (1227bp) protein (409aa)
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X6X1_9BURK rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;"
scnpilot_p_inoc_scaffold_443_54
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56260..57543)
DNA (1284bp) protein (428aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde 2,1-aminomutase n=3 Tax=Bordetella bronchiseptica RepID=K0N0S3_BORBM rbh
hemL; glutamate-1-semialdehyde 2,1-aminomutase
scnpilot_p_inoc_scaffold_443_55
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57546..58229)
DNA (684bp) protein (228aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I1R7_BORPD
scnpilot_p_inoc_scaffold_443_56
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58226..59143)
DNA (918bp) protein (306aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Phosphomethylpyrimidine kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGJ3_AZOSU
phosphomethylpyrimidine kinase
scnpilot_p_inoc_scaffold_443_57
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59253..59417
DNA (165bp) protein (55aa)
Rubredoxin n=2 Tax=Advenella kashmirensis RepID=I3U9K6_ADVKW
rubA2; rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
scnpilot_p_inoc_scaffold_443_58
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59444..60010
DNA (567bp) protein (189aa)
UPF0301 protein Bpet0561 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=Y561_BORPD
hypothetical protein
UPF0301 protein Bpet0561 {ECO:0000255|HAMAP-Rule:MF_00758}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii
scnpilot_p_inoc_scaffold_443_59
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60003..60413
DNA (411bp) protein (137aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1003200 speci
Putative Holliday junction resolvase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T198_ALCXX
Putative Holliday junction resolvase
scnpilot_p_inoc_scaffold_443_60
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60426..60965
DNA (540bp) protein (180aa)
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLO
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFS2_THIDA
Displaying items 31-60 of 77 in total

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