ggKbase home page

scnpilot_p_inoc_scaffold_443_36

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 37128..39020

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XKN2_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 637.0
  • Bit_score: 690
  • Evalue 1.30e-195
  • rbh
FAD-dependent cmnm(5)s(2)U34 oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 637.0
  • Bit_score: 696
  • Evalue 5.10e-198
  • rbh
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 637.0
  • Bit_score: 696
  • Evalue 2.50e-197

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter xylosoxidans → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
GTGTTTACGCCCTTGACTCCTTCCCGGCCGGCCTTTGATCAGGACGGCCTGCCCTATAGCCCGCTCTACGGCGACATCTATCATGCCGCCCAGGGGGCGTTGGAGCAGGCTCGCCATGTGTTCCTGGCGGGCAACGGTTTGCCGGAGCGGTGGCGCGGGCGCGAGCGCTTCACCGTGTGCGAGACGGGGTTCGGGCTGGGGTTGACCTTCCTGACGCTGTGGCGGGCGTGGCGCGACGATCCCCGGCGCAGCCGGCGGCTGCACGTGGTGTCCGTCGAGGCCCATCCGTTCACTCGCGAGGACCTGGCGGAACTGTTGCGCGCGCGGTTGCCCGCCGGTTGGGAGGACATGGCTGCGCAGTTGCTGGCGCAATGGCCGCCGCTCCTGCCGGGGCTGCACCGGCTGGACCTGGATGGCGGCGCGGTGACGCTGACCCTGGTTTTCGGCCTGGCCGAACAGGTCGTGCCCCGGCTGGTCCTGCGCGCGGACGCCTTTTTCCTGGATGGCTTCAAGCCCACGCTGAATCCCGGCATGTGGTCCGAACCGCTGATGCGCGCGCTGGCCAGACTGGCCGCGCCGGATGCCACGGCGGCGACCTGGGCAAGCGCCGGCGCGATGCGCCGGGCTTTGCAGACGGCGGGTTTCGAGGTCGAGCGCAGGGACGGCTTCGGCGGCAAGCTCCATATGACGGTGGCGCGCTACGCGCCGCGTTTCGAGCGCCGCCACGCGCCGGCCGAACCACCGTCCTTCGCCGAGCGCCATGCCGTGGTGGTGGGGGCGGGCATCGCCGGCGCCGGTGTGGCCCATGCGCTGGCGCTGCGCGGTTGGCGCGTGTCCGTGTTCGACGCGGCGTGGGGCGTCCCCGCGCAAGGGGCCGGCCACCTGGCCGCCGCGCTGACGCCGCTGCTGGCCCGGGACGACAGCCCGCGCGCGCGCCTGAGCCGCGCCGGCGCCTTGCGCGCGGCCGCGCGCTGGGCTCCGTGGATGGATGGCGGGATCGTCGCCCGCTGCGGCACCGTGCAGCAGGCCAAGTCGGACGACAAAGAGGCCGGCATGCATGCCATGCTGGCGGAGCTGGGTTTTCCGGCCGACTGGGTGCGCCCGGTGACGCGGGACGAGGCCAGCGGGCTGGCCGGCTGCCCGACGGCGCGCGGCGGCGTGTATTTCCCCGGCGGACTGCGGGTACGCCCGCGCCTGCTGGGCGCGGCGCTGCTGTCCCGGCCGGGCATCGAGGTTCGGGCCGCCCGCGTGGCCCGCATCGAGGCGCTGCCGGCGGACGTCCCCTCGGGGCGGCGCTGGCGGGCCGTCGATGGGGCGGGCGCCGTGCTGGCCGAGGCCGAGATCGTGGTGCTGGCCAATGCTGCCGAGGCGCCGCGGCTGCTGGCCGCCAGTGGCATGGCGCCCTCCGGCGGCGAACTGCCGGGCTTCTTCGGGCAAAAGGCCATAGCCGGGCAGATCACGCTGCTTCCGGCGCAGGAAGCCGGCTGGCAGCCGCCGCAATGCGTGGTGGCGGGCGAGGGCTATGTGCTGCCCGCCGTGGACGGCGCCTGCGTGGCTGGCAGCACCTATGTGCACGATGCCGCGCGGGCCGTCGCCTCGGCCGAGGGCCACGCGGTCAACCTGGAGCGGGCCGCCCGGTTGCTGCCGGAACTGGCCGGCGCCGGCCTGGATCCCGGCGCGCTCGCGGGCTGGGCCGGCTGGCGCGCCGTACTGCCCGGCAGGCTGCCGGTAATCGGCGAATCGCCCACTCACGGCGGGCTGTGGGCCGCTTCTGGCTATGCCTCGCGCGGGCTCAGTTGGTCGGCCCTGGGGGGCGATATCCTGGCCGCTTCCCTGGAAGGAGAGCCCATGATCCTGGAAGGGGATTTGCTGCGGATGATCGCCTGGCGCTGA
PROTEIN sequence
Length: 631
VFTPLTPSRPAFDQDGLPYSPLYGDIYHAAQGALEQARHVFLAGNGLPERWRGRERFTVCETGFGLGLTFLTLWRAWRDDPRRSRRLHVVSVEAHPFTREDLAELLRARLPAGWEDMAAQLLAQWPPLLPGLHRLDLDGGAVTLTLVFGLAEQVVPRLVLRADAFFLDGFKPTLNPGMWSEPLMRALARLAAPDATAATWASAGAMRRALQTAGFEVERRDGFGGKLHMTVARYAPRFERRHAPAEPPSFAERHAVVVGAGIAGAGVAHALALRGWRVSVFDAAWGVPAQGAGHLAAALTPLLARDDSPRARLSRAGALRAAARWAPWMDGGIVARCGTVQQAKSDDKEAGMHAMLAELGFPADWVRPVTRDEASGLAGCPTARGGVYFPGGLRVRPRLLGAALLSRPGIEVRAARVARIEALPADVPSGRRWRAVDGAGAVLAEAEIVVLANAAEAPRLLAASGMAPSGGELPGFFGQKAIAGQITLLPAQEAGWQPPQCVVAGEGYVLPAVDGACVAGSTYVHDAARAVASAEGHAVNLERAARLLPELAGAGLDPGALAGWAGWRAVLPGRLPVIGESPTHGGLWAASGYASRGLSWSALGGDILAASLEGEPMILEGDLLRMIAWR*