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scnpilot_p_inoc_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_545_1
unknown

Not on your lists

3..92
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_545_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127..996)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003011BD6 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_545_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1102..1812
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030E318A
Aspartate racemase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative aspartate racemase
scnpilot_p_inoc_scaffold_545_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1840..2664
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E0AFDC rbh
IclR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
iclR; IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_545_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2776..3333
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T8S6_ALCXX
Acetyltransferase domain protein {ECO:0000313|EMBL:KGY25699.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes
hypothetical protein
scnpilot_p_inoc_scaffold_545_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3330..3668)
DNA (339bp) protein (113aa)
Export-related chaperone CsaA n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X456_COMTE
tRNA-binding protein
tRNA-binding protein {ECO:0000313|EMBL:AIJ49449.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK
scnpilot_p_inoc_scaffold_545_7
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3737..4516
DNA (780bp) protein (260aa)
Methyltransferase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RH92_9PSED rbh
methyltransferase domain protein
Methyltransferase domain protein {ECO:0000313|EMBL:CDG82969.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Jan
scnpilot_p_inoc_scaffold_545_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4521..5396)
DNA (876bp) protein (292aa)
Amidohydrolase 2 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKH8_VARPS rbh
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ACS17276.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain
scnpilot_p_inoc_scaffold_545_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5400..6305)
DNA (906bp) protein (302aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKH9_VARPS rbh
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACS17277.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
scnpilot_p_inoc_scaffold_545_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6331..7374)
DNA (1044bp) protein (348aa)
Malate/L-lactate dehydrogenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI2_VARPS rbh
malate/L-lactate dehydrogenase
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ACS17280.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
scnpilot_p_inoc_scaffold_545_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7387..7800)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000364C3FC
Cupin {ECO:0000313|EMBL:KFL27311.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
cupin
scnpilot_p_inoc_scaffold_545_12
bacterium YEK0313, Bacteria

Not on your lists

comp(7828..8598)
DNA (771bp) protein (257aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI4_VARPS rbh
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:CEJ15532.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport systems inner membrane component
scnpilot_p_inoc_scaffold_545_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8595..9410)
DNA (816bp) protein (272aa)
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI5_VARPS rbh
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACS17283.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
scnpilot_p_inoc_scaffold_545_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9603..10604
DNA (1002bp) protein (334aa)
NMT1/THI5 like domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI6_VARPS rbh
NMT1/THI5 like domain-containing protein
NMT1/THI5 like domain protein {ECO:0000313|EMBL:ACS17284.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
scnpilot_p_inoc_scaffold_545_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10617..12230
DNA (1614bp) protein (538aa)
Monooxygenase FAD-binding n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI7_VARPS rbh
FAD-binding monooxygenase
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACS17285.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V
scnpilot_p_inoc_scaffold_545_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12227..12970
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI8_VARPS rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACS17286.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
scnpilot_p_inoc_scaffold_545_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13056..13772
DNA (717bp) protein (239aa)
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI9_VARPS
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACS17287.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
scnpilot_p_inoc_scaffold_545_18
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13777..14763)
DNA (987bp) protein (329aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EJF1_9BURK
Tricarboxylate transport protein TctC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24742.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_545_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15008..16306)
DNA (1299bp) protein (433aa)
Permeases of the major facilitator superfamily n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID36_AZOC5 rbh
major facilitator superfamily permease
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:BAF88876.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" sourc
scnpilot_p_inoc_scaffold_545_20
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16380..17375)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSP2_ALIDB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein
scnpilot_p_inoc_scaffold_545_21
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17438..18436)
DNA (999bp) protein (333aa)
Benzoate 1,2-dioxygenase reductase subunit n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MUH9_9ACTO
oxidoreductase FAD-binding subunit
Oxidoreductase FAD-binding subunit {ECO:0000313|EMBL:AJD47811.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcan
scnpilot_p_inoc_scaffold_545_22
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18448..18945)
DNA (498bp) protein (166aa)
Benzoate dioxygenase beta subunit n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JQ19_AGRRK
Small subunit of phenylpropionate dioxygenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
benzoate dioxygenase beta subunit
scnpilot_p_inoc_scaffold_545_23
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18945..20288)
DNA (1344bp) protein (448aa)
benzoate 1,2-dioxygenase subunit alpha n=1 Tax=Pseudomonas mendocina RepID=UPI00036FCBCE
benzoate 1,2-dioxygenase subunit alpha
Benzoate 1,2-dioxygenase subunit alpha {ECO:0000313|EMBL:AJD47808.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="A
scnpilot_p_inoc_scaffold_545_24
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20392..21357
DNA (966bp) protein (322aa)
Putative HTH-type transcriptional regulator, LysR family n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NHZ4_RALSL
putative HTH-type transcriptional regulator, LysR family
Putative HTH-type transcriptional regulator, LysR family {ECO:0000313|EMBL:CBJ40518.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia
scnpilot_p_inoc_scaffold_545_25
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21519..22490
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037FF068
peptidase M19, renal dipeptidase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
dipeptidase
scnpilot_p_inoc_scaffold_545_26
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22507..23271
DNA (765bp) protein (255aa)
Demethylmenaquinone methyltransferase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JG5_MESSB
menG1; hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
demethylmenaquinone methyltransferase-like protein
scnpilot_p_inoc_scaffold_545_27
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23268..23633
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002D9AEB6
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
NIPSNAP family containing protein
scnpilot_p_inoc_scaffold_545_28
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23678..24655
DNA (978bp) protein (326aa)
UPI0003CFF47E related cluster n=1 Tax=unknown RepID=UPI0003CFF47E
MFS transporter {ECO:0000313|EMBL:ESZ65504.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C13
hypothetical protein
scnpilot_p_inoc_scaffold_545_29
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24676..25476
DNA (801bp) protein (267aa)
IclR family regulatory protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXL2_TISMK
kipR; IclR family regulatory protein
IclR family regulatory protein {ECO:0000313|EMBL:AFK57500.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella
scnpilot_p_inoc_scaffold_545_30
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25493..26236
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000348FA7C
IclR family transcriptional regulator {ECO:0000313|EMBL:ETF02729.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmiren
IclR family transcriptional regulator
Displaying items 1-30 of 67 in total

View Taxonomy