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scnpilot_p_inoc_scaffold_551

Search features with annotation key words

Displaying items 31-60 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_551_31
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29881..31113)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3MZS5_KLEOX rbh
Uncharacterized protein {ECO:0000313|EMBL:EHT12838.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxyt
hypothetical protein rbh
scnpilot_p_inoc_scaffold_551_32
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31110..32027)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3MZS6_KLEOX rbh
Uncharacterized protein {ECO:0000313|EMBL:EHT12839.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxyt
ABC transporter permease
scnpilot_p_inoc_scaffold_551_33
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32066..33232)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3MZS7_KLEOX rbh
Uncharacterized protein {ECO:0000313|EMBL:EHT12840.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxyt
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_551_34
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33299..33907)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MFN2_9BURK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO90571.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. R
scnpilot_p_inoc_scaffold_551_35
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34036..34986)
DNA (951bp) protein (317aa)
LysR family transcriptional regulator n=1 Tax=Ralstonia sp. PBA RepID=I9BR43_9RALS
nahR1; putative LysR-type transcriptional regulator NahR Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_551_36
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35036..36208)
DNA (1173bp) protein (391aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal id=2044823 bin=GWD2_Deltaproteobacteria_55_8 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
acyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_551_37
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36222..37199)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037EE263
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_551_38
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37223..38776)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI000349EBE0 rbh
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
AMP-dependent synthetase and ligase
scnpilot_p_inoc_scaffold_551_39
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38773..39255)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI000349CDA6
Dehydratase {ECO:0000313|EMBL:KIZ47721.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
maoC like domain protein
scnpilot_p_inoc_scaffold_551_40
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39252..40364)
DNA (1113bp) protein (371aa)
Chloromuconate cycloisomerase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RA09_9RHIZ
enolase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
putative mandelate racemase/muconate lactonizing enzyme family protein
scnpilot_p_inoc_scaffold_551_41
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40364..41338)
DNA (975bp) protein (325aa)
MFS transporter n=1 Tax=Cupriavidus sp. WS RepID=UPI00035F830C
MFS transporter {ECO:0000313|EMBL:ESH93662.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
scnpilot_p_inoc_scaffold_551_42
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41369..42535)
DNA (1167bp) protein (389aa)
frc; formyl-coenzyme A transferase Frc (EC:2.8.3.16)
Formyl-coenzyme A transferase Frc n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GYV7_CUPNN rbh
Formyl-CoA transferase {ECO:0000313|EMBL:EYS91613.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4
scnpilot_p_inoc_scaffold_551_43
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42532..43230)
DNA (699bp) protein (233aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IX02_9BURK
dienelactone hydrolase family protein
Dienelactone hydrolase family protein {ECO:0000313|EMBL:AJZ64010.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
scnpilot_p_inoc_scaffold_551_44
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43255..44403)
DNA (1149bp) protein (383aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJH3_DESK7
scnpilot_p_inoc_scaffold_551_45
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44403..45380)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWZ2_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86837.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_551_46
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45382..46182)
DNA (801bp) protein (267aa)
Bll6374 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GH1_BRADU
citrate synthase
Bll6374 protein {ECO:0000313|EMBL:BAC51639.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
scnpilot_p_inoc_scaffold_551_47
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46309..48204)
DNA (1896bp) protein (632aa)
Glycoside hydrolase, family 15 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0X6_9BRAD rbh
Glycoside hydrolase, family 15 {ECO:0000313|EMBL:EAQ34111.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp
Glucoamylase
scnpilot_p_inoc_scaffold_551_48
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48285..49247)
DNA (963bp) protein (321aa)
4,5-dihydroxyphthalate decarboxylase; K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
phtD; 4,5-dihydroxyphthalate decarboxylase PhtD (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase PhtD n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GYG6_CUPNN
scnpilot_p_inoc_scaffold_551_49
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49280..50236)
DNA (957bp) protein (319aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EJF1_9BURK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EKZ99058.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="
bug; ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_551_50
bacterium YEK0313, Bacteria

Not on your lists

comp(50274..51728)
DNA (1455bp) protein (485aa)
gapD; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
aldehyde dehydrogenase n=1 Tax=Martelella mediterranea RepID=UPI00037A91DE rbh
Sulfoacetaldehyde dehydrogenase {ECO:0000313|EMBL:CEJ13097.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_p_inoc_scaffold_551_51
bacterium YEK0313, Bacteria

Not on your lists

comp(51845..52741)
DNA (897bp) protein (299aa)
Transcriptional regulatory protein LysR family n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G4T1_9BRAD
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:CEJ15843.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulatory protein LysR family
scnpilot_p_inoc_scaffold_551_52
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52998..53201
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036831D4
cspA; cold shock-like protein
Cold shock-like protein CspA; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC B
scnpilot_p_inoc_scaffold_551_53
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53364..54431)
DNA (1068bp) protein (356aa)
Linear amide C-N hydrolase, choloylglycine hydrolase family protein {ECO:0000313|EMBL:KCV64213.1}; EC=3.5.1.- {ECO:0000313|EMBL:KCV64213.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaprote
choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W5H2_BORPA rbh
scnpilot_p_inoc_scaffold_551_54
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54525..55517)
DNA (993bp) protein (331aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QJ69_BORBO
putative Bug-like extracytoplasmic solute binding receptor, TTT family Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_551_55
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55675..57228
DNA (1554bp) protein (518aa)
Carboxylyase-related protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13R33_BURXL
ubiD; ubiD decarboxylase family protein
Carboxylyase-related protein {ECO:0000313|EMBL:ABE33456.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
scnpilot_p_inoc_scaffold_551_56
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57493..57669)
DNA (177bp) protein (59aa)
membrane protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037FDD8B
UPF0391 membrane protein WM40_17050 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
membrane protein
scnpilot_p_inoc_scaffold_551_57
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57739..59061)
DNA (1323bp) protein (441aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_0
Serine--tRNA ligase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=SYS_BORPD rbh
scnpilot_p_inoc_scaffold_551_58
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59163..60914)
DNA (1752bp) protein (584aa)
phenol monooxygenase (EC:1.14.-.-)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035DC029 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD57786.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
scnpilot_p_inoc_scaffold_551_59
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60911..61765)
DNA (855bp) protein (285aa)
Putative thiosulfate sulfurtransferase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5Z122_NOCFA
thiosulfate sulfurtransferase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
scnpilot_p_inoc_scaffold_551_60
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61987..62634
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=2 Tax=Variovorax paradoxus RepID=C5D0Y7_VARPS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
Displaying items 31-60 of 61 in total

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