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scnpilot_p_inoc_scaffold_551_52

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 52998..53201

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036831D4 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 1.90e-28
cspA; cold shock-like protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 67.0
  • Bit_score: 118
  • Evalue 7.90e-25
Cold shock-like protein CspA; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC B similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 67.0
  • Bit_score: 118
  • Evalue 3.90e-24

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Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGAAACCGGTATCGTCAAGTGGTTCAACGCTGAAAAGGGCTTCGGCTTCATCATGCCCGACAACGGCGGCAAGGACCTGTTCGCGCATTTCTCCGAAATCCAGGGCAACGGCTACAAGTCGCTGCAGGAAAACCAGCGCGTCAGCTTCGTCTCTGGCCAAGGCCCCAAGGGTCCCCAGGCGACCAAGATCACCCCGCTGTAA
PROTEIN sequence
Length: 68
METGIVKWFNAEKGFGFIMPDNGGKDLFAHFSEIQGNGYKSLQENQRVSFVSGQGPKGPQATKITPL*