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scnpilot_p_inoc_scaffold_606

Search features with annotation key words

Displaying items 31-60 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_606_31
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25828..26832)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRF7_ALIDB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB82513.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_606_32
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26941..28053)
DNA (1113bp) protein (371aa)
Mandelate racemase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY90_9BURK rbh
Mandelate racemase {ECO:0000313|EMBL:ETF03989.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
mandelate racemase/muconate lactonizing protein
scnpilot_p_inoc_scaffold_606_33
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28088..29065)
DNA (978bp) protein (326aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TNC9_BORBO
hypothetical protein
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KDD57280.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
scnpilot_p_inoc_scaffold_606_34
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29197..30126
DNA (930bp) protein (310aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2RJQ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGD87383.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
YwqM (Probable transcriptional regulator YwqM)
scnpilot_p_inoc_scaffold_606_35
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30272..31123
DNA (852bp) protein (284aa)
Putative universal stress protein n=4 Tax=Bordetella RepID=K0MJ65_BORPB
Universal stress family protein {ECO:0000313|EMBL:KCB45463.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hi
universal stress protein
scnpilot_p_inoc_scaffold_606_36
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31126..32058)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X4R9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD45185.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_606_37
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32243..33226
DNA (984bp) protein (328aa)
Twin-arginine translocation pathway signal n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126F8_POLSJ
twin-arginine translocation pathway signal protein
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABE45584.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaro
scnpilot_p_inoc_scaffold_606_38
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33231..34853
DNA (1623bp) protein (541aa)
Sulfatase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J2N7_COMT2
sulfatase
Sulfatase {ECO:0000313|EMBL:KGH23231.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas test
scnpilot_p_inoc_scaffold_606_39
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34863..35405)
DNA (543bp) protein (181aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=391038 species="Ba
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034C79AE
2'-5' RNA ligase
scnpilot_p_inoc_scaffold_606_40
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35428..36393)
DNA (966bp) protein (322aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhizobium meliloti RepID=UPI000373C268 rbh
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ABR59540.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizob
scnpilot_p_inoc_scaffold_606_41
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36554..37870
DNA (1317bp) protein (439aa)
Ring hydroxylating dioxygenase, alpha subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q3_NOVAD
ring hydroxylating dioxygenase subunit alpha
Ring hydroxylating dioxygenase, alpha subunit {ECO:0000313|EMBL:ABD26120.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
scnpilot_p_inoc_scaffold_606_42
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37867..38373
DNA (507bp) protein (169aa)
Benzoate 1,2-dioxygenase beta subunit {ECO:0000313|EMBL:GAO53241.1}; EC=1.14.12.10 {ECO:0000313|EMBL:GAO53241.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
Aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q2_NOVAD
aromatic-ring-hydroxylating dioxygenase subunit beta
scnpilot_p_inoc_scaffold_606_43
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38384..39070
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=2 Tax=Alcaligenes RepID=M5J2K0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ERI32740.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_606_44
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39109..40821
DNA (1713bp) protein (571aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase n=1 Tax=Amorphus coralli RepID=UPI00037085F1 rbh
dihydroxy-acid dehydratase
scnpilot_p_inoc_scaffold_606_45
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40853..41734
DNA (882bp) protein (294aa)
Oxidoreductase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DN09_BRAJP rbh
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:BAL08889.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum U
scnpilot_p_inoc_scaffold_606_46
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41788..42762
DNA (975bp) protein (325aa)
Bll6093 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HA1_BRADU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ66554.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
scnpilot_p_inoc_scaffold_606_47
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42825..43601
DNA (777bp) protein (259aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000361E9EB rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EHR04689.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_606_48
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43598..44380
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJX7_9BRAD rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EHR04688.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
ABC transporter permease
scnpilot_p_inoc_scaffold_606_49
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44377..45144
DNA (768bp) protein (256aa)
Putative ABC transporter, permease protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EF75_BRASB
ABC transporter permease {ECO:0000313|EMBL:KJC34157.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
ABC transporter permease
scnpilot_p_inoc_scaffold_606_50
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45186..45965
DNA (780bp) protein (260aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromon
gip; hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WV52_9ALTE
scnpilot_p_inoc_scaffold_606_51
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46129..46836
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003643C25
glycosyl transferase family protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
scnpilot_p_inoc_scaffold_606_52
unknown

Not on your lists

46866..47276
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_606_53
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47281..48324
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557D5A
Uncharacterized protein {ECO:0000313|EMBL:CDX39874.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
scnpilot_p_inoc_scaffold_606_54
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

48324..49019
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000376AFBF
Glycosyltransferase {ECO:0000313|EMBL:BAQ61473.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
Sugar transferase-a glycosyl transferase
scnpilot_p_inoc_scaffold_606_55
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49016..49693
DNA (678bp) protein (226aa)
glycosyl transferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017449A6
Glycosyl transferase {ECO:0000313|EMBL:EJN07661.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. Y
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_606_56
unknown

Not on your lists

49690..50865
DNA (1176bp) protein (392aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_606_57
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50862..52619
DNA (1758bp) protein (586aa)
ABC transporter related protein n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SDS9_PROVI
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_606_58
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52542..53363)
DNA (822bp) protein (274aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5W860_BURSC rbh
uroporphyrin-III C-methyltransferase
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:ADG15605.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkh
scnpilot_p_inoc_scaffold_606_59
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53388..56096)
DNA (2709bp) protein (903aa)
napA; nitrate reductase (EC:1.7.99.4)
Nitrate reductase subunit alpha n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1ANQ4_9NEIS rbh
Nitrate reductase subunit alpha {ECO:0000313|EMBL:ERE04373.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseu
scnpilot_p_inoc_scaffold_606_60
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56112..56441)
DNA (330bp) protein (110aa)
nitrite reductase (NAD(P)H) small subunit; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Oxygenase n=2 Tax=Xanthomonas campestris pv. translucens RepID=K8Z2J8_XANCT
nitrite reductase (NAD(P)H) small subunit
Displaying items 31-60 of 74 in total

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