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scnpilot_p_inoc_scaffold_606

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_606_1
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..142
DNA (141bp) protein (47aa)
petA; ubiquinol-cytochrome C reductase iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria;
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Achromobacter piechaudii HLE RepID=J4YJ12_9BURK
scnpilot_p_inoc_scaffold_606_2
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271..1656
DNA (1386bp) protein (462aa)
petB; ubiquinol-cytochrome c reductase cytochrome b subunit (EC:1.10.2.2)
Cytochrome b n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HW92_BORPD rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
scnpilot_p_inoc_scaffold_606_3
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1713..2549
DNA (837bp) protein (279aa)
Cytochrome C1 n=3 Tax=Bordetella bronchiseptica RepID=K0N4A7_BORBM
Cytochrome C {ECO:0000313|EMBL:KGD93350.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
petC; cytochrome C1
scnpilot_p_inoc_scaffold_606_4
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2635..3246
DNA (612bp) protein (204aa)
Glutathione S-transferase, C-terminal domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X652_9BURK
Glutathione S-transferase, C-terminal domain protein {ECO:0000313|EMBL:EFF77688.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;
Stringent starvation protein A
scnpilot_p_inoc_scaffold_606_5
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3341..3877
DNA (537bp) protein (179aa)
Stringent starvation B protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FYM8_9BURK
ClpXP protease specificity-enhancing factor
Stringent starvation B protein {ECO:0000313|EMBL:EOA06543.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspir
scnpilot_p_inoc_scaffold_606_6
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4017..4934
DNA (918bp) protein (306aa)
putative taurine catabolism dioxygenase TauD/TfdA (EC:1.14.11.17)
Putative taurine catabolism dioxygenase TauD/TfdA {ECO:0000313|EMBL:ABE36805.1}; EC=1.14.11.17 {ECO:0000313|EMBL:ABE36805.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000382D547
scnpilot_p_inoc_scaffold_606_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4940..5974
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RUW7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR26860.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense A
scnpilot_p_inoc_scaffold_606_8
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5967..6791
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034573B0
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ESR26861.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Luti
binding-protein-dependent transport systems inner membrane component
scnpilot_p_inoc_scaffold_606_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6784..7566
DNA (783bp) protein (261aa)
ABC transporter {ECO:0000313|EMBL:ESR26862.1}; EC=3.6.3.25 {ECO:0000313|EMBL:ESR26862.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;
ABC transporter n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R4I1_9RHIZ
ABC transporter-like protein
scnpilot_p_inoc_scaffold_606_10
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7566..8984
DNA (1419bp) protein (473aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q8N0_METSZ
Drug resistance transporter, EmrB/QacA subfamily
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:CCJ07147.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" sou
scnpilot_p_inoc_scaffold_606_11
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9004..9819
DNA (816bp) protein (272aa)
Rhodanese domain protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F7ZZX2_CELGA
Rhodanese domain protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL
scnpilot_p_inoc_scaffold_606_12
unknown

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10131..10247
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_606_13
unknown

Not on your lists

10244..10372
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_606_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10567..10773
DNA (207bp) protein (69aa)
Cold shock protein CapA n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HTS9_ACHXA
cold shock-like protein
Cold shock-like protein {ECO:0000313|EMBL:CDM25237.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
scnpilot_p_inoc_scaffold_606_15
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10842..11105)
DNA (264bp) protein (88aa)
Translation initiation factor IF-1 n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YDN8_9RHOO
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera lin
translation initiation factor IF-1
scnpilot_p_inoc_scaffold_606_16
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11121..12497
DNA (1377bp) protein (459aa)
Probable MFS transporter n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXT2_BORPD rbh
MFS family transporter
Probable MFS transporter {ECO:0000313|EMBL:CAP40577.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (st
scnpilot_p_inoc_scaffold_606_17
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12522..12944)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HPX5_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:KGD87983.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
hypothetical protein
scnpilot_p_inoc_scaffold_606_18
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12950..14110)
DNA (1161bp) protein (387aa)
PF07394 domain protein n=3 Tax=Burkholderia cenocepacia RepID=U1ZA59_9BURK rbh
PF07394 domain protein {ECO:0000313|EMBL:ERI27746.1}; TaxID=985077 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
hypothetical protein
scnpilot_p_inoc_scaffold_606_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14115..15521)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLQ8_DELAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX36847.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
scnpilot_p_inoc_scaffold_606_20
unknown

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comp(15508..15831)
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_606_21
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15899..16870)
DNA (972bp) protein (324aa)
Putative secreted protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I570_BORPD rbh
bug17; hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAP41065.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (s
scnpilot_p_inoc_scaffold_606_22
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16912..17859)
DNA (948bp) protein (316aa)
Bordetella petrii strain DSM 12804, complete genome {ECO:0000313|EMBL:CAP41064.1}; EC=3.1.1.17 {ECO:0000313|EMBL:CAP41064.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I567_BORPD rbh
hypothetical protein
scnpilot_p_inoc_scaffold_606_23
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17843..18643)
DNA (801bp) protein (267aa)
short chain dehydrogenase (EC:1.-.-.-)
Putative short chain dehydrogenase {ECO:0000313|EMBL:CAP41063.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAP41063.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcali
Putative short chain dehydrogenase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I564_BORPD rbh
scnpilot_p_inoc_scaffold_606_24
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18681..19232)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I560_BORPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP41062.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_606_25
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19278..20147)
DNA (870bp) protein (290aa)
Putative dicarboxylic acid hydrolase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I554_BORPD rbh
dicarboxylic acid hydrolase
Putative dicarboxylic acid hydrolase {ECO:0000313|EMBL:CAP41060.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell
scnpilot_p_inoc_scaffold_606_26
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20180..21154
DNA (975bp) protein (325aa)
Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I551_BORPD rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR-family {ECO:0000313|EMBL:CAP41059.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_p_inoc_scaffold_606_27
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21164..22342)
DNA (1179bp) protein (393aa)
Flavohemoprotein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZE0_9DELT rbh
Flavohemoprotein {ECO:0000256|HAMAP-Rule:MF_01252}; Flavohemoglobin {ECO:0000256|HAMAP-Rule:MF_01252}; Hemoglobin-like protein {ECO:0000256|HAMAP-Rule:MF_01252}; Nitric oxide dioxygenase {ECO:0000256|
dihydropteridine reductase
scnpilot_p_inoc_scaffold_606_28
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22508..24091
DNA (1584bp) protein (528aa)
transcriptional regulator n=1 Tax=Pseudomonas mandelii RepID=UPI00029AB98F rbh
anaerobic nitric oxide reductase transcription regulator
Anaerobic nitric oxide reductase transcription regulator {ECO:0000313|EMBL:AHZ71634.1}; TaxID=1147786 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
scnpilot_p_inoc_scaffold_606_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24126..25001
DNA (876bp) protein (292aa)
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRF6_ALIDB
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32005.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_606_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25011..25817)
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRF8_ALIDB rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32004.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
short-chain dehydrogenase/reductase sdr
Displaying items 1-30 of 74 in total

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