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scnpilot_p_inoc_scaffold_606_29

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 24126..25001

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRF6_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 286.0
  • Bit_score: 279
  • Evalue 5.40e-72
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32005.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 288.0
  • Bit_score: 284
  • Evalue 1.40e-73
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 286.0
  • Bit_score: 279
  • Evalue 1.50e-72

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGACCTGCAAAGCCTGAAGACCTTCGTCGCATGCGTCGAGGAAAAAAGCCTGAGCCGTTGCGCCGACCGGCTGAACGTCGTGGCCTCGGCGGTAAGCAAGCGGCTGGCGGAGCTCGAGCGCGAGCACGGCGTATCGCTGCTGCGGCGGACCGGCCGGGGCGTCGAGCCCACGGCGGCGGGCGAGGCGCTGTACCGCCATGCGACCTCGCTGCTGTCGGCGGCCCGCCAGTTGGAGCGGACCCTGGCGAGCTTCCGCGACGACGGCGAGTCCCACATCCGGATCGCCGCCTGCCGGTCGGTCGTCCTGCAGTACCTGCCGCGCGCCATCAGCCTGCTGCGCCGCGTGTGTCCAGGCCATCGCGTCGACATCGTCGAGGCGTCCAGCGTCGAGATCCCGGCGCTGGTCACTCAGGGGGAGGCGGAGATCGGAATCTATCACGCGCCGTTTCCGCCTCCGGGCCTGCACTTCGTGGAGTACCGCCGCGAACGGGTCGCCCTGGTCGTCCCGATGGGGCACGCGCTGGCACGGAGTGGTCCGGTGCGTTTCTTCGACACGCTGGGCCATGACTACGTCGGCTATTTCCCGCGCCACGACCTGGCCAACTTCCAGCGATTGATCGGCGAAAACCTGCCCCGGCCCATCAACGTCAGCGCGCAGGTCTCCAATCCCGAGGCGCGCTGCATGCTGGTGCGCGAGGGGCTGGGCCTGGCCCTGATGGCCGAGGGGCTGGCGCGGACCTATGCCGACCGGACGGGGGTGGAGGTCGTCGCGCTGGCGGACGAATGGGCGGGCCGCCAGATCTGGATGGCATGCGTCGATCCTGCGGCCCTGCCCGAAGGCGCGCGCGAACTGTTCGTCCGCCCCCAGGCTTGA
PROTEIN sequence
Length: 292
MDLQSLKTFVACVEEKSLSRCADRLNVVASAVSKRLAELEREHGVSLLRRTGRGVEPTAAGEALYRHATSLLSAARQLERTLASFRDDGESHIRIAACRSVVLQYLPRAISLLRRVCPGHRVDIVEASSVEIPALVTQGEAEIGIYHAPFPPPGLHFVEYRRERVALVVPMGHALARSGPVRFFDTLGHDYVGYFPRHDLANFQRLIGENLPRPINVSAQVSNPEARCMLVREGLGLALMAEGLARTYADRTGVEVVALADEWAGRQIWMACVDPAALPEGARELFVRPQA*