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scnpilot_p_inoc_scaffold_851

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_851_1
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..491
DNA (489bp) protein (163aa)
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I5C3_BORPD
hypothetical protein
Bordetella petrii strain DSM 12804, complete genome {ECO:0000313|EMBL:CAP41085.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" so
scnpilot_p_inoc_scaffold_851_2
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

495..2030
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I5C6_BORPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP41086.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_851_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1966..2703)
DNA (738bp) protein (246aa)
membrane protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035E17AD rbh
integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AAZ98240.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thi
scnpilot_p_inoc_scaffold_851_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2900..3991
DNA (1092bp) protein (364aa)
Twin-arginine translocation pathway signal n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126F8_POLSJ rbh
twin-arginine translocation pathway signal protein
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABE45584.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaro
scnpilot_p_inoc_scaffold_851_5
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4047..4904
DNA (858bp) protein (286aa)
Uncharacterized protein n=36 Tax=Bordetella RepID=F4LAK3_BORPC rbh
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CAE44726.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis
scnpilot_p_inoc_scaffold_851_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4906..5121)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XHN1_ALCXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH04155.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
scnpilot_p_inoc_scaffold_851_7
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5162..5689)
DNA (528bp) protein (176aa)
Chromate transport protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X687_9BURK
Chromate transport protein {ECO:0000313|EMBL:EFF77723.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter pi
chromate transporter
scnpilot_p_inoc_scaffold_851_8
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5686..6276)
DNA (591bp) protein (197aa)
Chromate transporter n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T069_ALCXX
Chromate transporter {ECO:0000313|EMBL:EGP46158.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavi
Chromate transporter
scnpilot_p_inoc_scaffold_851_9
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6420..7334
DNA (915bp) protein (305aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achro
Beta-lactamase (EC:3.5.2.6)
Beta-lactamase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XIV2_ALCXX rbh
scnpilot_p_inoc_scaffold_851_10
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7348..8313)
DNA (966bp) protein (322aa)
Ketopantoate reductase ApbA/PanE domain protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNC2_PANSA
Uncharacterized protein {ECO:0000313|EMBL:KJV10464.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
ketopantoate reductase ApbA/PanE domain-containing protein
scnpilot_p_inoc_scaffold_851_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

8477..9229
DNA (753bp) protein (251aa)
GntR family transcriptional regulator n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028A22E3
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_851_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9258..10250
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4H8_9BURK
hypothetical protein Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_851_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

10279..10980
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037D88EA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_851_14
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11099..13012
DNA (1914bp) protein (638aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JCW5_BURP8
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_851_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13105..13314
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE2_9BURK
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_851_16
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13475..14185)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM48 RepID=J3G773_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:EJM56210.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
NYN domain-containing protein
scnpilot_p_inoc_scaffold_851_17
unknown

Not on your lists

comp(14324..14752)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_851_18
unknown

Not on your lists

comp(15039..15197)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_851_19
unknown

Not on your lists

comp(15200..15538)
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_851_20
unknown

Not on your lists

15871..16032
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_851_21
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16162..17613)
DNA (1452bp) protein (484aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:EJO32153.1}; EC=4.2.1.79 {ECO:0000313|EMBL:EJO32153.1};; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Achromobacter piechaudii HLE RepID=J4YPN5_9BURK rbh
scnpilot_p_inoc_scaffold_851_22
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17754..18929)
DNA (1176bp) protein (392aa)
Citrate synthase n=3 Tax=Ralstonia solanacearum RepID=B5SIR2_RALSL rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum UW5
2-methylcitrate synthase/citrate synthase II family protein
scnpilot_p_inoc_scaffold_851_23
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19083..19985)
DNA (903bp) protein (301aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
prpB; methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase n=2 Tax=Bordetella holmesii RepID=M5NPI9_9BORD rbh
scnpilot_p_inoc_scaffold_851_24
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20195..22168
DNA (1974bp) protein (658aa)
ATPase AAA n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2K3L1_9BURK rbh
ATPase AAA {ECO:0000313|EMBL:ESJ21023.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
prpR; transcriptional regulator; sigma-54 interacting regulator
scnpilot_p_inoc_scaffold_851_25
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22172..23365)
DNA (1194bp) protein (398aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.99.7)
Acyl-CoA dehydrogenase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JEN6_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESJ23824.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC
scnpilot_p_inoc_scaffold_851_26
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23534..24481
DNA (948bp) protein (316aa)
Putative transcriptional regulator n=1 Tax=Burkholderia terrae BS001 RepID=I5D2N4_9BURK rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EIN02403.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
gcdR; transcriptional regulator, LysR family
scnpilot_p_inoc_scaffold_851_27
bacterium YEK0313, Bacteria

Not on your lists

comp(24471..25163)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314E27B
HTH-type transcriptional repressor NicS {ECO:0000313|EMBL:CEJ15034.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
tetR; transcriptional regulator
scnpilot_p_inoc_scaffold_851_28
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25200..26153)
DNA (954bp) protein (318aa)
amidase n=1 Tax=Sphingomonas wittichii RepID=UPI00037D39E6 rbh
acetamidase/formamidase
Acetamidase/Formamidase {ECO:0000313|EMBL:ABQ67985.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
scnpilot_p_inoc_scaffold_851_29
bacterium YEK0313, Bacteria

Not on your lists

comp(26150..27145)
DNA (996bp) protein (332aa)
UPI0003CE12A4 related cluster n=1 Tax=unknown RepID=UPI0003CE12A4 rbh
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CEJ11507.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oligopeptide ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_851_30
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27142..28161)
DNA (1020bp) protein (340aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003705A0F
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC56103.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sourc
oligopeptide/dipeptide ABC transporter ATPase
Displaying items 1-30 of 40 in total

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