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scnpilot_p_inoc_scaffold_1018

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1018_1
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2574)
DNA (2574bp) protein (858aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bo
GHKL domain protein n=31 Tax=Bordetella RepID=V8UFV3_BORBO rbh
two-component sensor kinase
scnpilot_p_inoc_scaffold_1018_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2571..3416)
DNA (846bp) protein (282aa)
Putative exported protein n=3 Tax=Bordetella bronchiseptica RepID=K0MCE0_BORBM
PF14334 domain protein {ECO:0000313|EMBL:KCV59771.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisept
hypothetical protein
scnpilot_p_inoc_scaffold_1018_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3413..4732)
DNA (1320bp) protein (440aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752, ECO:0000313|EMBL:CKI21745.1}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=85698 species="Bacteria; Proteobacteria
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SYE6_ALCXX rbh
methyltransferase
scnpilot_p_inoc_scaffold_1018_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4732..5679)
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1167634 species="
Methionyl-tRNA formyltransferase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XTI3_ALCXX rbh
scnpilot_p_inoc_scaffold_1018_5
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5881..6381)
DNA (501bp) protein (167aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FB38D3
scnpilot_p_inoc_scaffold_1018_6
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6643..7752
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IFQ5_BORPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAP45080.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_1018_7
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7866..8324
DNA (459bp) protein (153aa)
Protein Smg homolog n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F006_9BURK
Protein Smg homolog {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsen
hypothetical protein
scnpilot_p_inoc_scaffold_1018_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8575..11226
DNA (2652bp) protein (884aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=562971 species="Bacteria; Proteobac
DNA topoisomerase n=1 Tax=Achromobacter piechaudii HLE RepID=J4QJP0_9BURK rbh
DNA topoisomerase III
scnpilot_p_inoc_scaffold_1018_9
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11238..11807
DNA (570bp) protein (190aa)
SET domain-containing protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037756AD
SET domain protein {ECO:0000313|EMBL:KCB40210.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1018_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11852..12595)
DNA (744bp) protein (248aa)
Rickettsia 17 kDa surface antigen family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQP7_ACHXA
rickettsia 17 kDa surface antigen family protein 1
Rickettsia 17 kDa surface antigen family protein 1 {ECO:0000313|EMBL:ADP13587.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;"
scnpilot_p_inoc_scaffold_1018_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12735..12980
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QQB7_BORBO
hypothetical protein
PF12512 family protein {ECO:0000313|EMBL:KCV59171.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisept
scnpilot_p_inoc_scaffold_1018_12
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12970..13818)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U6L9_BORBO
Uncharacterized protein {ECO:0000313|EMBL:CCN25387.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisep
hypothetical protein
scnpilot_p_inoc_scaffold_1018_13
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13968..14960
DNA (993bp) protein (331aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:ADN61946.1}; EC=1.1.1.169 {ECO:0000313|EMBL:ADN61946.1};; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholde
2-dehydropantoate 2-reductase n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TIN7_BURSG rbh
scnpilot_p_inoc_scaffold_1018_14
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15086..15955
DNA (870bp) protein (290aa)
Fumarase alpha subunit {ECO:0000313|EMBL:ABM58790.1}; EC=4.2.1.2 {ECO:0000313|EMBL:ABM58790.1};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ve
Fumarase alpha subunit n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WMD3_VEREI
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha
scnpilot_p_inoc_scaffold_1018_15
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15976..16605
DNA (630bp) protein (210aa)
Fumarate hydratase class I beta subunit n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L8L8_BURGS
fumarase family protein
Fumarase family protein {ECO:0000313|EMBL:KGC11509.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source=
scnpilot_p_inoc_scaffold_1018_16
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16645..17625
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023781C3
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM58792.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter
scnpilot_p_inoc_scaffold_1018_17
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17767..18387
DNA (621bp) protein (207aa)
Flavin reductase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSK9_9BURK
Flavin reductase {ECO:0000313|EMBL:EYC50749.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. N
putative FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family
scnpilot_p_inoc_scaffold_1018_18
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18522..19277
DNA (756bp) protein (252aa)
aldolase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023781C2
Aldolase {ECO:0000313|EMBL:EYC50750.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R
HpcH/HpaI aldolase
scnpilot_p_inoc_scaffold_1018_19
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19309..20172
DNA (864bp) protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:EYC50751.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
Putative uncharacterized protein id=1269054 bin=GWE1_Burkholderiales_65_30 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_1018_20
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20169..20936)
DNA (768bp) protein (256aa)
transcriptional regulator n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377E3C
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AJK49196.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_p_inoc_scaffold_1018_21
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21019..21972)
DNA (954bp) protein (318aa)
Amidohydrolase 2 n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L8M3_BURGS rbh
Amidohydrolase {ECO:0000313|EMBL:EYC50748.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Nia
amidohydrolase 2
scnpilot_p_inoc_scaffold_1018_22
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22170..22835
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVG8_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:ETF03348.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmiren
psrA; Transcriptional regulator PsrA
scnpilot_p_inoc_scaffold_1018_23
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22856..23641
DNA (786bp) protein (262aa)
Cyclase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUL8_9BURK rbh
Cyclase {ECO:0000313|EMBL:ETF03347.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
cyclase
scnpilot_p_inoc_scaffold_1018_24
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23694..24668
DNA (975bp) protein (325aa)
MFS transporter n=1 Tax=Advenella kashmirensis W13003 RepID=V8QTS3_9BURK rbh
MFS transporter {ECO:0000313|EMBL:ETF03346.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1018_25
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24796..25107
DNA (312bp) protein (104aa)
[2Fe-2S]-binding domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X5U1_9BURK
bacterioferritin-associated ferredoxin
[2Fe-2S]-binding domain protein {ECO:0000313|EMBL:EFF77879.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
scnpilot_p_inoc_scaffold_1018_26
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25474..25950
DNA (477bp) protein (159aa)
Bacterioferritin n=38 Tax=Bordetella RepID=F4L8N3_BORPC
bfr; bacterioferritin
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strai
scnpilot_p_inoc_scaffold_1018_27
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26000..26629)
DNA (630bp) protein (210aa)
Uncharacterized protein n=11 Tax=Bordetella pertussis RepID=F4L8N2_BORPC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CRD78518.1}; Uncharacterized protein {ECO:0000313|EMBL:CRI69208.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
scnpilot_p_inoc_scaffold_1018_28
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26689..28314)
DNA (1626bp) protein (542aa)
Peptide chain release factor 3 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F3K2_9BURK rbh
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=477184 species="Bacteria; Proteobacteria; Betaprot
scnpilot_p_inoc_scaffold_1018_29
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28374..29216)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003723113
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
bchO; alpha/beta hydrolase
scnpilot_p_inoc_scaffold_1018_30
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29366..29767
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8QZ55_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KAK46529.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jian
hypothetical protein
Displaying items 1-30 of 32 in total

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