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scnpilot_p_inoc_scaffold_1029

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1029_1
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1T3_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92334.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
scnpilot_p_inoc_scaffold_1029_2
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

472..2583
DNA (2112bp) protein (704aa)
Elongation factor G 1 n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=EFG1_BURXL rbh
fusA; translation elongation factor G
Elongation factor G 1 {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G 1 {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholde
scnpilot_p_inoc_scaffold_1029_3
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2580..3590)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H4Z5_METFK rbh
hypothetical protein
Tax=BJP_08E140C01_Spirochaeta_53_29
scnpilot_p_inoc_scaffold_1029_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3701..4831
DNA (1131bp) protein (377aa)
Permease n=1 Tax=Thauera sp. 63 RepID=N6X5V3_9RHOO rbh
ABC transporter permease {ECO:0000313|EMBL:KGY27226.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosox
hypothetical protein
scnpilot_p_inoc_scaffold_1029_5
Acinetobacter sp. WC-141, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5022..6365)
DNA (1344bp) protein (448aa)
gdhA2; glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Acinetobacter baumannii WC-141 RepID=K8ZZS8_ACIBA
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=903915 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus
scnpilot_p_inoc_scaffold_1029_6
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6685..6999
DNA (315bp) protein (105aa)
Small multidrug resistance protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REQ6_DESPD
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ADW19149.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Des
scnpilot_p_inoc_scaffold_1029_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7016..7822
DNA (807bp) protein (269aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=85698 species="Bacteria; Proteo
UPI0003D61AD0 related cluster n=1 Tax=unknown RepID=UPI0003D61AD0
Glutamate racemase
scnpilot_p_inoc_scaffold_1029_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7971..8516
DNA (546bp) protein (182aa)
folE2; GTP cyclohydrolase 2 (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HUV0_ACHXA rbh
scnpilot_p_inoc_scaffold_1029_9
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8889..9677
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GAA6_9BURK rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOA05597.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herb
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_1029_10
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9742..10737
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CSQ7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ46650.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
putative ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1029_11
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10737..11585
DNA (849bp) protein (283aa)
ABC transporter permease n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002EE3329 rbh
ABC transporter permease {ECO:0000313|EMBL:EOA05599.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
putative ABC transporter permease protein
scnpilot_p_inoc_scaffold_1029_12
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11595..12377
DNA (783bp) protein (261aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AIY39692.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AIY39692.1};; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM78 RepID=J3IRZ4_9PSED rbh
scnpilot_p_inoc_scaffold_1029_13
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12459..13286
DNA (828bp) protein (276aa)
Transcriptional regulator, IclR family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46V78_CUPPJ rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KJK23357.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_1029_14
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13291..14541
DNA (1251bp) protein (417aa)
Flavoprotein n=1 Tax=Azoarcus sp. KH32C RepID=H0PS01_9RHOO
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:KIF80608.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbasp
flavoprotein
scnpilot_p_inoc_scaffold_1029_15
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14598..14807
DNA (210bp) protein (70aa)
Heavy-metal-associated protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N531_9PSED
Heavy-metal-associated protein {ECO:0000313|EMBL:EIK96571.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
heavy metal transport/detoxification protein
scnpilot_p_inoc_scaffold_1029_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14774..15850)
DNA (1077bp) protein (359aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1519190 species="Bacteria; Proteobacteria; Be
DNA polymerase IV n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W8Z4_9BURK rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1029_17
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15876..16610)
DNA (735bp) protein (245aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:KCB36358.1}; EC=2.4.-.- {ECO:0000313|EMBL:KCB36358.1};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
waaE; lipopolysaccharide core biosynthesis glycosyl transferase (EC:2.-.-.-)
Lipopolysaccharide core biosynthesis glycosyl transferase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KYR6_BORA1 rbh
scnpilot_p_inoc_scaffold_1029_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16795..18213
DNA (1419bp) protein (473aa)
ATP-dependent RNA helicase n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UE45_ALCXX rbh
ATP-dependent RNA helicase rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:EFV82742.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xy
scnpilot_p_inoc_scaffold_1029_19
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18257..19135)
DNA (879bp) protein (293aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
aminoacyl-tRNA synthetase (EC:6.1.1.17)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037B02B7 rbh
scnpilot_p_inoc_scaffold_1029_20
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19135..20079)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FB93_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK64358.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1029_21
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20210..20911
DNA (702bp) protein (234aa)
Uncharacterized protein n=34 Tax=Bordetella RepID=F4L9I4_BORPC rbh
hypothetical protein
Pirin family protein {ECO:0000313|EMBL:ETH90538.1}; TaxID=1331279 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis STO
scnpilot_p_inoc_scaffold_1029_22
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21042..21971
DNA (930bp) protein (310aa)
DnaJ domain-containing protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4YUT6_9BURK rbh
DnaJ domain-containing protein {ECO:0000313|EMBL:EJO33033.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
DnaJ domain-containing protein
scnpilot_p_inoc_scaffold_1029_23
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21974..22291
DNA (318bp) protein (106aa)
MerR family transcriptional regulator n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SVV3_ALCXX
MerR family transcriptional regulator {ECO:0000313|EMBL:KGD89943.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
hypothetical protein
scnpilot_p_inoc_scaffold_1029_24
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22439..23281
DNA (843bp) protein (281aa)
IclR family transcriptional regulator n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QSS7_RALPI
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AGW93213.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
scnpilot_p_inoc_scaffold_1029_25
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23281..24078
DNA (798bp) protein (266aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AIY39696.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AIY39696.1};; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
short-chain dehydrogenase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00030954A1 rbh
scnpilot_p_inoc_scaffold_1029_26
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24071..25750
DNA (1680bp) protein (560aa)
ilvB; acetolactate synthase 1 large subunit (EC:2.2.1.6)
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D4X8_9BURK rbh
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase {ECO:0000313|EMBL:EJL84631.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
scnpilot_p_inoc_scaffold_1029_27
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25754..27232
DNA (1479bp) protein (493aa)
Aldehyde dehydrogenase (EC:1.2.1.3)
Nad+ dependent betaine aldehyde dehydrogenase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GAB2_9BURK rbh
Nad+ dependent betaine aldehyde dehydrogenase {ECO:0000313|EMBL:EOA05607.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" so
scnpilot_p_inoc_scaffold_1029_28
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27247..28206
DNA (960bp) protein (320aa)
NADH dehydrogenase (EC:1.6.99.3) rbh
NADH dehydrogenase {ECO:0000313|EMBL:AIY39700.1}; EC=1.6.99.3 {ECO:0000313|EMBL:AIY39700.1};; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Col
Putative ring-cleavage extradiol dioxygenase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LHJ5_9BURK rbh
scnpilot_p_inoc_scaffold_1029_29
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28215..28538
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Pandoraea RepID=V5UH19_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK48210.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gluma
scnpilot_p_inoc_scaffold_1029_30
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28538..28765
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Pandoraea RepID=V5UIQ7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC69814.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativora
Displaying items 1-30 of 33 in total

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