ggKbase home page

scnpilot_p_inoc_scaffold_102_87

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 86708..88219

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Acidovorax sp. CF316 RepID=J1E8V9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 476.0
  • Bit_score: 532
  • Evalue 3.60e-148
RND efflux system outer membrane lipoprotein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 471.0
  • Bit_score: 535
  • Evalue 5.90e-149
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 474.0
  • Bit_score: 520
  • Evalue 5.20e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGCCTCTCGCTCGCGCCAAGTCCTTTACTTCCTCGTTTCCCCGCCCCGCCCTGCTCGGCCTGGGCCTGGCCCCACTGCTGCTGATTGCGGGCTGCAGCCTGCAACCTCCCGCGCCGTCCGTGCCGCTGGCCACGCCGGCCGGCTGGCAGGCTCCGCTGCCCGCCGCCGCGGCCGCCGAACCCGCCCTGCCTCACCACTCCAGCCAGCAGCGTCTGCTGGAATGGTGGCAACAGGCCGGCGACCCGGCCCTGCCCGGACTGATCGAAGCGGCGCAGACGGCCAGCCCGACCGTGGGCACCGCCCGCTCGCGCTTCCTGCAGGCCCGGGCCACCCGCGTGTCGTCCGGCGCCGCGCTGGGACCCACGCTGGATGCCACGGCCCAGACCAGCCGCGGCTTTTCCCAGATCGCGGGCGGCGTCGCCACGCAGAACCAGGCCGGCCTGCAGGCCTCGTGGGAGATCGACCTGTTCGGCGCCAACTCCGCCACGCGCGACGCCGCGCAGGCCCGCCTGGAGGGTGCGCAGGCGCAGTGGCACGACGCGCGCACCTCGGTGGCTGCCGAAGTGGCCAACGAACTGAACAACTTCCGTAGTTGCCGCCGTGAGCTCGCCATCCAGGAATCGGATGCGGCTTCGCGCGCGGAAAGCTCGCGCCTGACCGACCTCGCCATGCGCGCGGGTTTCCAGTCCACCGCCAACGCCGCGCTGGCGCGCGCCAGCAGCGCCGAGGCCGCCGCCCGCGCCCGCCAGCAGCGCGCCGCGTGCGACATCAGCGTCAAGGCGCTGGTGGCGCTGACCGCGCTGGACGAACCCACGCTGCGGGCTCGCCTGGCCGCGCCGGCGCAGCCTCCGTCCGACACCTTGTTCGCCATCGACCACCTACCCGCCGCCGTGCTGGCACAGCGCCCCGACCTGTTCAACGCCGACCGCAACGTGGCGGCGGCCAGCGCCGAGGTCGGCAGCGCGCAGGCCAAGCGCTACCCACGCCTGACGCTGGCCGGCAGCGTGGGCGCGGCCTCGTTCAGGGCGCGCGGCACGAATGTCGACGTCTCGACCTGGTCCATCGGCCCGCTGGCGGTGACGCTGCCGCTGTTCGACGGCGGCCGCCACCGCGCCGACATCGACGCCGCCCAGGCCCGCTACGACGAAGCCGTCACCCAGTACCGCGCCACGGCGCGCCAGGCCGTGCGCGAAGTGGAGCAAGCCCTGGTCAACCTGGAAAGCACGGCCGCGCGCACCACCGACGCCCGCGCCGCGGTCGAGGGCTACCAGGCCTCGTTCGAGGCCACCGAGCAGCGCTATCGTGGCGGCCTGGCCAGCCTGCTGGAACTGGAGGAATCGCGGCGCATGCTGCTGACGGCCCGCACCACCCAGTCCGCGCTGGAGCGCGAACGCATGGCGGCCTGGATCGCGCTGTACCGCGCGGCGGGCGGCGGCTGGAGCCAGGAAGCGCCCATGCCGCCGGACACGCCGCCCGCGGCATCCACCGCGCCGGCCACCCATCCCTCCTGA
PROTEIN sequence
Length: 504
MPLARAKSFTSSFPRPALLGLGLAPLLLIAGCSLQPPAPSVPLATPAGWQAPLPAAAAAEPALPHHSSQQRLLEWWQQAGDPALPGLIEAAQTASPTVGTARSRFLQARATRVSSGAALGPTLDATAQTSRGFSQIAGGVATQNQAGLQASWEIDLFGANSATRDAAQARLEGAQAQWHDARTSVAAEVANELNNFRSCRRELAIQESDAASRAESSRLTDLAMRAGFQSTANAALARASSAEAAARARQQRAACDISVKALVALTALDEPTLRARLAAPAQPPSDTLFAIDHLPAAVLAQRPDLFNADRNVAAASAEVGSAQAKRYPRLTLAGSVGAASFRARGTNVDVSTWSIGPLAVTLPLFDGGRHRADIDAAQARYDEAVTQYRATARQAVREVEQALVNLESTAARTTDARAAVEGYQASFEATEQRYRGGLASLLELEESRRMLLTARTTQSALERERMAAWIALYRAAGGGWSQEAPMPPDTPPAASTAPATHPS*