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scnpilot_p_inoc_scaffold_102_88

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 88281..89432

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Acidovorax radicis RepID=UPI0002375FC0 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 372.0
  • Bit_score: 443
  • Evalue 2.20e-121
RND family efflux transporter MFP subunit Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 373.0
  • Bit_score: 438
  • Evalue 7.50e-120
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 380.0
  • Bit_score: 430
  • Evalue 7.00e-118

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGATCCCGTCCATGCCGCTACGCCCTCTCATCGCCGCCGCCGTGCTCGGCGCCATCCTGACCGGAGCCTTCCTCGCCCCCGCCCTGCGCGCCGCCGACACCGGCGCCACGCCAGCCATCCGGCCGGCCCTGACCGTCACCGTCGCCCAGCCGCGGATGCAGTCCCTGCGCGTCGCCCTGCAGGCCAACGGCAACATCATGGCCTGGCAGGAAGCCAGCCTGGGCGCCGAGATCGGCGGCCTGCGCCTGCAGGACGTCCTGGTCAACGTGGGCGATACAGTCAAGGCCGGCCAGGTACTGGCCACCTTCGCGCAGGAAACCGTGCGCGCGGACATCGCCCAGGCCCGCGCCGCGCTGGCCGAGGCCGAGGCCAGCGCCGCCGAGGCGCGCGCCAACGCCGAACGGGCCCAGTCCCTGAAGGCCTCCGGCGCGCTGAGCGAATCGCAGATCAACCAGTACGTGACCGGCGGCCAGACCGCCCAGGCGCGTGTGGAATCCGCCCGCGCCAGCCTGGCCGCGCAGGAGCTGCGCCTGAAATTCACGCAGGTCCGCGCGCCCGACAGCGGCGTCATCTCGTCGCGCACCGCCACGGTGGGCGCGGTCGTGAGCGCCGGCACCGAACTCTTCCGCATGATCCGCAGGAGCCGCCTGGAATGGCGCGGCGAGGTCACCTCCGCCGAGGTCGGCCGCGTGCGCGTGGGCGATCCCGTCACCGTCGTCGCGGCCAGCGGCGAGCGCCTGCAGGGCAAGGTCCGCACCGTCGGCCCCACCGTCGATCCGCAGACGCGCAACACCCTGGTCTACGTCGACCTGCCCACCGCCGGCGCGCCAAACTCCTCGGCCAAGGCCGGCATGTTCGCGCGCGGCGAGTTCGAGCTGGGCGCCGCACAGGGGCTGACCGTGCCGCAGCAGGCCGTGGTCATGCGCGAGGCCTTCAATTACGTCTTCGTCGTGGACGCGGACAACCGCGTTACCCAGCGCAAGATCCAGGCCGGCCGGCGCGACGGCGACCGCGTCGAGGTGCTGGACGGCCTCGCGTCCACCGACCGCGTCGCCGTGCGCGGCGCCGGCTTCCTGACCGACGGCGACCTGGTGCGCGTGGTCGACACGCCCGCTCCCGCGGCCACCCCCGCCACCGCCGTGACGCGCTGA
PROTEIN sequence
Length: 384
MIPSMPLRPLIAAAVLGAILTGAFLAPALRAADTGATPAIRPALTVTVAQPRMQSLRVALQANGNIMAWQEASLGAEIGGLRLQDVLVNVGDTVKAGQVLATFAQETVRADIAQARAALAEAEASAAEARANAERAQSLKASGALSESQINQYVTGGQTAQARVESARASLAAQELRLKFTQVRAPDSGVISSRTATVGAVVSAGTELFRMIRRSRLEWRGEVTSAEVGRVRVGDPVTVVAASGERLQGKVRTVGPTVDPQTRNTLVYVDLPTAGAPNSSAKAGMFARGEFELGAAQGLTVPQQAVVMREAFNYVFVVDADNRVTQRKIQAGRRDGDRVEVLDGLASTDRVAVRGAGFLTDGDLVRVVDTPAPAATPATAVTR*