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scnpilot_p_inoc_scaffold_143_13

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 12271..13104

Top 3 Functional Annotations

Value Algorithm Source
IclR type regulator TsaQ1 n=1 Tax=Comamonas testosteroni RepID=Q6XL52_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 248.0
  • Bit_score: 229
  • Evalue 3.60e-57
HTH-type transcriptional regulator TsaQ1/TsaQ2; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 248.0
  • Bit_score: 229
  • Evalue 5.00e-57
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 248.0
  • Bit_score: 177
  • Evalue 4.50e-42

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGGCCATCATTCCCGATATGCGGACATCCTCTGCCGGCAAGACCCGGATGGCCAGCGCCGACGGCCGGCGCGGCGACTTCATGACTTCACTGGCCAAGGGGCTCGAAATCCTGGCCGCGTTCGAGGTCGGCCATCCCCTGGGCAATCAGGAACTGGTCGCCATCACGGGCCTGCCCAAGACCACCGTCTCGCGCATCACCGGCACCCTGGCATCGCTGGGCTACCTGCGCCTGGACGAACAGAGCCGCAAATATTCGATGGGCGCGCGGGTACTGGGGCTGGGTGCCAGCGTACAACGGCACATCGGTCTCCTGCGCACGGCCCGGCCCCACATGCAGCGCCTGGCGGACGAGCTGGATATCGCGGTGATCCTGGGGGCGCGCGACCGCACGGGCCTGGTCTTCCTGGAAGTGATCCATCCTCCGCGCAATGCGCTGACGATCAACACCGACGCCGGTTCGGTGGTGCCCATCGAACGCACGTCCATCGGGCTGGCGTATCTGGTCGCCGCGCCCGTGCCCGAACGCGTGCACATGCTGCAGGCGCTGCGCGACGCGCATCCGGACGACTGGGAGGACATACGCGGCGTGGTCGAGCGGGCCCACAAGGACTATCGCGAGCGCGGCTTCGTGGTGTCCCAGCGCGGACGGGGCGGCCTGATCAGCGGCGTGGGCGTGCCGATGGTGCTGGGCTCGAACGGCGTCTTCTCCTTCGCCTGCGTGGGCCCTTCGATCCAGTTGTCCGAGGTCCGCCTGGTCCAGGTGCTGGGCCCACGCCTGGTGGAAACAGTGTCCGCCATCGGACAGGCCATGCGCGCCGCGGAACGCGGATAG
PROTEIN sequence
Length: 278
MAIIPDMRTSSAGKTRMASADGRRGDFMTSLAKGLEILAAFEVGHPLGNQELVAITGLPKTTVSRITGTLASLGYLRLDEQSRKYSMGARVLGLGASVQRHIGLLRTARPHMQRLADELDIAVILGARDRTGLVFLEVIHPPRNALTINTDAGSVVPIERTSIGLAYLVAAPVPERVHMLQALRDAHPDDWEDIRGVVERAHKDYRERGFVVSQRGRGGLISGVGVPMVLGSNGVFSFACVGPSIQLSEVRLVQVLGPRLVETVSAIGQAMRAAERG*