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scnpilot_p_inoc_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_143_1
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
PepSY-associated TM helix n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I3F4_PSEUO
Peptidase {ECO:0000313|EMBL:ETM65314.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
putative iron-regulated membrane protein
scnpilot_p_inoc_scaffold_143_2
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255..2690)
DNA (2436bp) protein (812aa)
TonB-dependent siderophore receptor n=1 Tax=Pseudomonas sp. GM55 RepID=J3AP99_9PSED rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJM68948.1}; Flags: Precursor;; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomon
ligand-gated channel
scnpilot_p_inoc_scaffold_143_3
Pseudomonas sp. GM41(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2792..3760)
DNA (969bp) protein (323aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J3FXS5_9PSED rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EUB74206.1}; TaxID=1144708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
Fe2+-dicitrate sensor membrane protein
scnpilot_p_inoc_scaffold_143_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3771..4274)
DNA (504bp) protein (168aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D2G8_COMTE
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EFI62675.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;"
ECF subfamily RNA polymerase sigma-24 factor
scnpilot_p_inoc_scaffold_143_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4417..4995
DNA (579bp) protein (193aa)
Metal dependent phosphohydrolase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H0J4_METFK
Uncharacterized protein {ECO:0000313|EMBL:KIF80574.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
metal dependent phosphohydrolase
scnpilot_p_inoc_scaffold_143_6
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5042..6427
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000374BE8F rbh
Inner membrane protein {ECO:0000313|EMBL:EON90942.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipo
inner membrane protein
scnpilot_p_inoc_scaffold_143_7
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6424..7350
DNA (927bp) protein (309aa)
Oxidoreductase n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8AX67_9ALTE
Oxidoreductase {ECO:0000313|EMBL:EON90943.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus
oxidoreductase
scnpilot_p_inoc_scaffold_143_8
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7364..7999)
DNA (636bp) protein (212aa)
Transcriptional regulator, XRE-family n=2 Tax=Burkholderiaceae RepID=Q0JZP4_CUPNH
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:EON18003.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralston
scnpilot_p_inoc_scaffold_143_9
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8152..9123
DNA (972bp) protein (324aa)
Extra-cytoplasmic solute receptor n=1 Tax=Ralstonia sp. PBA RepID=I9BT79_9RALS rbh
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:EIZ02926.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia s
extra-cytoplasmic solute receptor
scnpilot_p_inoc_scaffold_143_10
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9157..9936
DNA (780bp) protein (260aa)
Class II aldolase/adducin domain protein {ECO:0000313|EMBL:EIZ02925.1}; EC=4.1.2.17 {ECO:0000313|EMBL:EIZ02925.1};; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Class II aldolase/adducin domain protein n=1 Tax=Ralstonia sp. PBA RepID=I9KRV5_9RALS rbh
class II aldolase/adducin domain protein
scnpilot_p_inoc_scaffold_143_11
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9956..11092
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DL86_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL94301.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
cytoplasmic protein
scnpilot_p_inoc_scaffold_143_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11130..12092)
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=B7WWH2_COMTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EED65875.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Coma
hypothetical protein
scnpilot_p_inoc_scaffold_143_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12271..13104
DNA (834bp) protein (278aa)
IclR type regulator TsaQ1 n=1 Tax=Comamonas testosteroni RepID=Q6XL52_COMTE
HTH-type transcriptional regulator TsaQ1/TsaQ2; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomon
putative transcriptional regulator
scnpilot_p_inoc_scaffold_143_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13209..14012
DNA (804bp) protein (268aa)
Alpha/beta hydrolase fold protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH1_COMTE rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EED65874.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
hydrolase; 3-oxoadipate enol-lactonase
scnpilot_p_inoc_scaffold_143_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14044..15552
DNA (1509bp) protein (503aa)
Carotenoid oxygenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH3_COMTE rbh
Carotenoid oxygenase {ECO:0000313|EMBL:EED65876.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-
carotenoid oxygenase
scnpilot_p_inoc_scaffold_143_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15549..16253
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Comamonas testosteroni RepID=UPI0002DCADD5
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EED65877.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
hydrolase or acyltransferase
scnpilot_p_inoc_scaffold_143_17
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16250..17431
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0K9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ02300.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
acyl-CoA transferase
scnpilot_p_inoc_scaffold_143_18
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17421..18404
DNA (984bp) protein (328aa)
2-nitropropane dioxygenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S2Y5_9BURK rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:EHP43200.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus bas
2-nitropropane dioxygenase
scnpilot_p_inoc_scaffold_143_19
unknown

Not on your lists

18455..19189
DNA (735bp) protein (245aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_143_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19347..20336
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X5_ALIDB
hypothetical protein
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:GAO24852.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
scnpilot_p_inoc_scaffold_143_21
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20347..21468
DNA (1122bp) protein (374aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZFL4_9PROT
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EKM98395.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" s
putative mandelate racemase/muconate-lactonizing protein
scnpilot_p_inoc_scaffold_143_22
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21492..22667
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003621E3C rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA95415.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
scnpilot_p_inoc_scaffold_143_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22689..23639)
DNA (951bp) protein (317aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X4J1_VARPD rbh
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU47822.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
scnpilot_p_inoc_scaffold_143_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23775..24749
DNA (975bp) protein (325aa)
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X5E7_VARPD rbh
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU47823.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
scnpilot_p_inoc_scaffold_143_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24746..25987
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X657_VARPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGU47824.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
scnpilot_p_inoc_scaffold_143_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25984..26904
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X6N0_VARPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU47825.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
scnpilot_p_inoc_scaffold_143_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26947..28101)
DNA (1155bp) protein (385aa)
thiolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A362F rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAD23222.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
thiolase, C-terminal domain-containing protein 10
scnpilot_p_inoc_scaffold_143_28
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28098..28484)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXY0_ACHXA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP19934.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
scnpilot_p_inoc_scaffold_143_29
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28511..29770)
DNA (1260bp) protein (420aa)
acyl-CoA transferase (EC:2.8.3.16)
Probable acyl-CoA transferase/carnitine dehydrastase {ECO:0000313|EMBL:CAP43550.1}; EC=2.8.3.16 {ECO:0000313|EMBL:CAP43550.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
Probable acyl-CoA transferase/carnitine dehydrastase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IUI9_BORPD rbh
scnpilot_p_inoc_scaffold_143_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29778..30755)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003644163 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23219.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
bug62; hypothetical protein
Displaying items 1-30 of 202 in total

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