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scnpilot_p_inoc_scaffold_143_23

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(22689..23639)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X4J1_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 308.0
  • Bit_score: 361
  • Evalue 9.00e-97
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 308.0
  • Bit_score: 361
  • Evalue 2.50e-97
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU47822.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 308.0
  • Bit_score: 361
  • Evalue 1.30e-96

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGCAATCGTCCGAGATCCTGGACAGACTCGTGGCACGCGTGCGTTTCCGCCACCTGTCGATGTTGCTGGAGCTGCGGCGCACCGGCACGATCGGCAAGGCGGCCGCCCGGCTGCACCTGACTCAGCCGGCCCTGAGCAAGGCGTTGAAGGAAATCGAGGACGCCTTCGGGTTTCCGATCTTTCGGCGCGGCGCGCGCGGACTGGCGCCCACGCCGGCAGGGCAGGCGGTCCTGAACGGTGCCGCGGTCCTGCTGGCCGAACTGGGGCACCTGAACGAGGTGACCCGTCTCTCGCGGCAGGAGCCGGCCATGGTCCTGCACCTGGGCGCGCCCTCGGCGATCGGCGCGGGCATGCTGCCCGCCATTCTGGCGAAACTGCGGGCCGGCGACGAACGCGTCATCGTGCGCCTGAGCGAAGATCCCGTCCCCCGGCTTTTCGAGCGGCTGGTCGAAGGCGAGCTCGACGCGTTGCTGACGTCCTACAACCAAGCGGTTTTTTCCACCCACCGCTCCAGCCGACTGGTGTACGAACATTATCTGGAGCACAAGTACGTCGTCATTGCGCCGACGGGAAGTCCGCTGGCCAGGAAGCGGGTCGTGACGTGGAAGGAACTGCTCGACATGCCGTGGATCCTGCCCGATTCCTCGTTCCTGGCGCGCCAGGCGCTCGAAGGCAATTTCCTGCGGGCCGGCGTGGCCGTGCCGGAGCCGGTGGTGACCTCCAACCATCCCGCGACCACCATACAACTGGTCGCGGCCGGGGTCGGCGTTTCCGCCGTTCCGGAAACCATGATGCATGCCGAAGCGCGCATTCGCCGCGTTGCGCGGGTACGTGTCGAGAGCATGCCCCAGGCGGTGCCGACCGCGCTGGTCTACCGCGCCGGCAGTGCGGACCATCCACAACTGCTGCGGTTGCGGGAAGCGATGGCGGAGATGGTGCGGGCCGCTTGA
PROTEIN sequence
Length: 317
MQSSEILDRLVARVRFRHLSMLLELRRTGTIGKAAARLHLTQPALSKALKEIEDAFGFPIFRRGARGLAPTPAGQAVLNGAAVLLAELGHLNEVTRLSRQEPAMVLHLGAPSAIGAGMLPAILAKLRAGDERVIVRLSEDPVPRLFERLVEGELDALLTSYNQAVFSTHRSSRLVYEHYLEHKYVVIAPTGSPLARKRVVTWKELLDMPWILPDSSFLARQALEGNFLRAGVAVPEPVVTSNHPATTIQLVAAGVGVSAVPETMMHAEARIRRVARVRVESMPQAVPTALVYRAGSADHPQLLRLREAMAEMVRAA*