ggKbase home page

scnpilot_p_inoc_scaffold_143

Search features with annotation key words

Displaying items 121-150 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_143_121
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125881..127179
DNA (1299bp) protein (433aa)
Rieske (2Fe-2S) region n=1 Tax=Burkholderia sp. YI23 RepID=G8MNF1_9BURK rbh
rieske (2Fe-2S) domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
rieske 2Fe-2S region
scnpilot_p_inoc_scaffold_143_122
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127185..128294
DNA (1110bp) protein (370aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQV2_COMTE rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EED67097.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Coma
alcohol dehydrogenase GroES domain protein
scnpilot_p_inoc_scaffold_143_123
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128521..129780
DNA (1260bp) protein (420aa)
Putative dioxygenase alpha subunit n=1 Tax=uncultured bacterium RepID=G9FAF9_9BACT
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48711.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
Rieske (2Fe-2S) protein
scnpilot_p_inoc_scaffold_143_124

Not on your lists

129802..130803
DNA (1002bp) protein (334aa)
Extracytoplasmic solute receptor n=1 Tax=uncultured bacterium RepID=G9FAF8_9BACT
Extracytoplasmic solute receptor {ECO:0000313|EMBL:AEV56814.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_143_125

Not on your lists

comp(130816..131310)
DNA (495bp) protein (165aa)
MarR family transcriptional regulator n=1 Tax=uncultured bacterium RepID=G9FAF7_9BACT
MarR family transcriptional regulator {ECO:0000313|EMBL:AEV56813.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_143_126
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131400..131708)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NDQ0_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ29331.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33
scnpilot_p_inoc_scaffold_143_127
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131705..132046)
DNA (342bp) protein (114aa)
Putative membrane protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XLK7_VARPD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGU53762.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxu
scnpilot_p_inoc_scaffold_143_128
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132174..133223
DNA (1050bp) protein (350aa)
UPI0003D6216E related cluster n=1 Tax=unknown RepID=UPI0003D6216E rbh
Oxidoreductase, aldo/keto reductase family
Putative aldo-keto reductase {ECO:0000313|EMBL:CKI11893.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xyl
scnpilot_p_inoc_scaffold_143_129
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133243..134229)
DNA (987bp) protein (329aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036B3D2D
Tricarboxylate transport protein TctC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23237.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_143_130
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134258..135154)
DNA (897bp) protein (299aa)
Uncharacterized protein n=4 Tax=Bordetella RepID=K0M9E8_BORPB rbh
hypothetical protein; K07045 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_143_131
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

135237..136157
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U8T6_9CYAN
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AFY90664.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;
scnpilot_p_inoc_scaffold_143_132
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136147..137139)
DNA (993bp) protein (331aa)
4,5-dihydroxyphthalate decarboxylase; K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12C97_POLSJ rbh
scnpilot_p_inoc_scaffold_143_133
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137385..138296)
DNA (912bp) protein (304aa)
Putative LysR type transcriptional regulator n=1 Tax=Cupriavidus basilensis RepID=D5KB57_9BURK
Putative LysR type transcriptional regulator {ECO:0000313|EMBL:ADE20405.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source=
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_143_134
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138364..139377)
DNA (1014bp) protein (338aa)
Alpha/beta hydrolase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUW0_ALIDB
alpha/beta hydrolase
Alpha/beta hydrolase domain-containing protein {ECO:0000313|EMBL:AEB85546.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sou
scnpilot_p_inoc_scaffold_143_135
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139442..140389
DNA (948bp) protein (316aa)
Transcriptional regulator, LysR-family n=2 Tax=Burkholderiaceae RepID=Q0KDZ3_CUPNH
LysR family transcriptional regulator {ECO:0000313|EMBL:EYS89294.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
h16_A0630; LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_143_136
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140512..141075
DNA (564bp) protein (188aa)
cupin n=1 Tax=Variovorax paradoxus RepID=UPI000369ADAB
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADX54076.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bu
scnpilot_p_inoc_scaffold_143_137
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141120..142094
DNA (975bp) protein (325aa)
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XC68_VARPD rbh
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU50527.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
scnpilot_p_inoc_scaffold_143_138
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142137..142898
DNA (762bp) protein (254aa)
Class II aldolase and adducin N-terminal domain protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HX54_ACHXA rbh
class II aldolase and adducin N-terminal domain-containing protein 4
Class II aldolase and adducin N-terminal domain protein 4 {ECO:0000313|EMBL:ADP16408.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobac
scnpilot_p_inoc_scaffold_143_139
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143226..143603
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030F464F
inner membrane protein
Putative inner membrane protein {ECO:0000313|EMBL:CAP40667.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pet
scnpilot_p_inoc_scaffold_143_140
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143682..144548
DNA (867bp) protein (289aa)
atpB; ATP synthase F0, A subunit (EC:3.6.3.14)
ATP synthase subunit a n=2 Tax=Bordetella holmesii RepID=M5NMB7_9BORD
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
scnpilot_p_inoc_scaffold_143_141
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144792..145034
DNA (243bp) protein (81aa)
atpE; F0F1 ATP synthase subunit C (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTL5_PUSST
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
scnpilot_p_inoc_scaffold_143_142
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145117..145587
DNA (471bp) protein (157aa)
ATP synthase subunit b n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FDU4_9BURK
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
ATP synthase B chain
scnpilot_p_inoc_scaffold_143_143
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

145677..146216
DNA (540bp) protein (180aa)
ATP synthase subunit delta n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T0P6_ALCXX
ATP synthase subunit delta {ECO:0000313|EMBL:KGQ02438.1}; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae
ATP synthase F0F1 subunit delta
scnpilot_p_inoc_scaffold_143_144
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146270..147811
DNA (1542bp) protein (514aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTL1_PUSST rbh
ATP synthase beta chain
scnpilot_p_inoc_scaffold_143_145
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147874..148752
DNA (879bp) protein (293aa)
atpG; ATP synthase, F1 sector, gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Ralstonia RepID=D8NV18_RALSL rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=305
scnpilot_p_inoc_scaffold_143_146
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148795..150213
DNA (1419bp) protein (473aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=3 Tax=Alcaligenes RepID=J0ULD9_ALCFA rbh
ATP synthase beta chain rbh
scnpilot_p_inoc_scaffold_143_147
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150357..150779
DNA (423bp) protein (141aa)
ATP synthase epsilon chain (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X6J4_9BURK
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
scnpilot_p_inoc_scaffold_143_148
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150933..151715)
DNA (783bp) protein (261aa)
MhpC; 3-oxoadipate enol-lactonase (EC:3.1.1.24)
Alpha/beta hydrolase fold protein id=1735156 bin=GWD2_Deltaproteobacteria_55_8 species=Bhargavaea cecembensis genus=Bhargavaea taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
hydrolase Tax=GWD2_Deltaproteobacteria_55_8_curated
scnpilot_p_inoc_scaffold_143_149
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151740..152708)
DNA (969bp) protein (323aa)
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X4Y9_VARPD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative Bug-like extracytoplasmic solute binding receptor, TTT family
scnpilot_p_inoc_scaffold_143_150

Not on your lists

152815..153573
DNA (759bp) protein (253aa)
IclR family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6KTY3_9BACT
IclR family transcriptional regulator {ECO:0000313|EMBL:BAH89434.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
iclR helix-turn-helix domain protein
Displaying items 121-150 of 202 in total

View Taxonomy