ggKbase home page

scnpilot_p_inoc_scaffold_143

Search features with annotation key words

Displaying items 181-202 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_143_181
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182573..183472)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037DE87E rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB05170.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pant
transcriptional regulator, LysR family
scnpilot_p_inoc_scaffold_143_182
unknown

Not on your lists

183848..184003
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_143_183
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184042..184407
DNA (366bp) protein (122aa)
Putative multidrug resistance transporter n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AP37_PSERE
Spermidine export protein MdtJ {ECO:0000313|EMBL:KJK09428.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
SMR family multidrug efflux pump
scnpilot_p_inoc_scaffold_143_184
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184417..184749
DNA (333bp) protein (111aa)
Putative membrane transporter of cations and cationic drugs n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D7D4_LARHH
multidrug efflux system protein MdtI
Putative membrane transporter of cations and cationic drugs {ECO:0000313|EMBL:ACO74375.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribac
scnpilot_p_inoc_scaffold_143_185
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184796..185869
DNA (1074bp) protein (358aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KU39_BORA1 rbh
scnpilot_p_inoc_scaffold_143_186
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186212..188473
DNA (2262bp) protein (754aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=340100 species="Bacteria; P
Primosomal protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HY53_BORPD rbh
priA; primosomal protein
scnpilot_p_inoc_scaffold_143_187
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188598..190697
DNA (2100bp) protein (700aa)
rep; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1003200 species="Bacteria; Proteobacteria; Betapr
ATP-dependent DNA helicase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T0Q4_ALCXX rbh
scnpilot_p_inoc_scaffold_143_188
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190886..192979
DNA (2094bp) protein (698aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V9E7_MYCVA rbh
scnpilot_p_inoc_scaffold_143_189
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192996..195182
DNA (2187bp) protein (729aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=2 Tax=Mycobacterium RepID=A1UNV9_MYCSK rbh
scnpilot_p_inoc_scaffold_143_190
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195194..195952
DNA (759bp) protein (253aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
putative carboxymethylenebutenolidase
Carboxymethylenebutenolidase id=1804928 bin=GWB2_Desulfobacterales_56_26 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
scnpilot_p_inoc_scaffold_143_191
Rhodococcus sp. YK2, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

195952..197091
DNA (1140bp) protein (380aa)
Extradiol dioxygenase n=1 Tax=Rhodococcus sp. R04 RepID=G0ZPN1_9NOCA
Extradiol dioxygenase {ECO:0000313|EMBL:BAC00806.1}; TaxID=169536 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. YK2.;"
catalytic subunit of meta cleavage enzyme
scnpilot_p_inoc_scaffold_143_192
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197146..198009
DNA (864bp) protein (288aa)
cmtE; 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase (EC:3.7.1.-) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
cmtE; 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase (EC:3.7.1.-)
hypothetical protein n=1 Tax=Ureibacillus thermosphaericus RepID=UPI000317390F
scnpilot_p_inoc_scaffold_143_193
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

198002..198397
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9D6_NAKMY
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACV77204.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 7000
scnpilot_p_inoc_scaffold_143_194
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

198577..199269
DNA (693bp) protein (231aa)
GntR family transcriptional regulator n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036A3163
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AEK45942.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis medit
scnpilot_p_inoc_scaffold_143_195
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199277..199744)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V8J5_PSEA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR81586.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
scnpilot_p_inoc_scaffold_143_196
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199861..200634
DNA (774bp) protein (258aa)
Transcriptional regulator, GntR family n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T9K6_BURSG
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_143_197
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200670..201644)
DNA (975bp) protein (325aa)
Extra-cytoplasmic solute receptor family protein 56 n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4T4_9BURK rbh
Extra-cytoplasmic solute receptor family protein 56 {ECO:0000313|EMBL:EHP42471.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;
extra-cytoplasmic solute receptor family protein 56
scnpilot_p_inoc_scaffold_143_198
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201797..202774)
DNA (978bp) protein (326aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTY1_POLNA
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM39109.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" so
scnpilot_p_inoc_scaffold_143_199
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203005..204234
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTK1_PUSST rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC20965.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
scnpilot_p_inoc_scaffold_143_200
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204244..204546)
DNA (303bp) protein (101aa)
Transcriptional regulator n=7 Tax=Proteobacteria RepID=A1W959_ACISJ
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AKA21915.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaph
scnpilot_p_inoc_scaffold_143_201
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204530..204955)
DNA (426bp) protein (142aa)
Uncharacterized protein n=7 Tax=Proteobacteria RepID=A1W958_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ45837.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_143_202
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205191..206093)
DNA (903bp) protein (301aa)
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HY91_BORPD rbh
Cytochrome C {ECO:0000313|EMBL:KCB45571.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
Displaying items 181-202 of 202 in total

View Taxonomy