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scnpilot_p_inoc_scaffold_143_183

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 184042..184407

Top 3 Functional Annotations

Value Algorithm Source
Putative multidrug resistance transporter n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AP37_PSERE similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 111.0
  • Bit_score: 125
  • Evalue 3.20e-26
Spermidine export protein MdtJ {ECO:0000313|EMBL:KJK09428.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 117.0
  • Bit_score: 127
  • Evalue 1.50e-26
SMR family multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 117.0
  • Bit_score: 126
  • Evalue 6.90e-27

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Taxonomy

Pseudomonas sp. 5 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGCGACATTGGTTTTTTCTTGCCATCGCCATCGTTGCCGAGGTGGCGGGCACCAGCTTCATGAAATGGAGCAGTATCCACGGACACCTGGGCGGCCTCGCCGCGATGTTCGTCCTGTTGGGCGCGTCGTACTACGCGCTGTCGCTGGCCGTGACCCGCGTGCCGGTGGGCCTGGCCTACGCCGTCTGGGAAGGCGTGGGGCTGGTGGCGATCACGCTGGTCAGCCTGGCCTGGTTCGGTGAAAGCATCGGCCCCGCCAAGGCGGCCGGCATCGCCGCCGTGCTGGGCGGCATCCTGCTCATCAAGCGCGGCATGACGCCGGCCGCGGACGAAGACACCGTTCCCGCGCTTGCCGCCCCGCGGTAA
PROTEIN sequence
Length: 122
MRHWFFLAIAIVAEVAGTSFMKWSSIHGHLGGLAAMFVLLGASYYALSLAVTRVPVGLAYAVWEGVGLVAITLVSLAWFGESIGPAKAAGIAAVLGGILLIKRGMTPAADEDTVPALAAPR*